Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Sssca1P56873 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC9.55□□□□□ -0.88
Sssca1P56873 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Sssca1P56873 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Sssca1P56873 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Sssca1P56873 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Sssca1P56873 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Sssca1P56873 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Sssca1P56873 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Sssca1P56873 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Sssca1P56873 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Sssca1P56873 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Sssca1P56873 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Sssca1P56873 Gm37422-201ENSMUST00000193794 4718 ntBASIC9.55□□□□□ -0.88
Sssca1P56873 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Sssca1P56873 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Sssca1P56873 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
Sssca1P56873 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Sssca1P56873 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC9.55□□□□□ -0.88
Sssca1P56873 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Sssca1P56873 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Sssca1P56873 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Sssca1P56873 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Sssca1P56873 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Sssca1P56873 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Sssca1P56873 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC9.54□□□□□ -0.88
Sssca1P56873 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sssca1P56873 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sssca1P56873 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sssca1P56873 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC9.54□□□□□ -0.88
Sssca1P56873 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sssca1P56873 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Sssca1P56873 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sssca1P56873 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Sssca1P56873 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sssca1P56873 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC9.54□□□□□ -0.88
Sssca1P56873 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sssca1P56873 AC167022.1-201ENSMUST00000218647 1458 ntBASIC9.54□□□□□ -0.88
Sssca1P56873 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sssca1P56873 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sssca1P56873 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Sssca1P56873 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sssca1P56873 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Sssca1P56873 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC9.54□□□□□ -0.88
Sssca1P56873 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Sssca1P56873 Gm37737-201ENSMUST00000195013 1638 ntBASIC9.54□□□□□ -0.88
Sssca1P56873 Gm3836-201ENSMUST00000211377 1613 ntBASIC9.54□□□□□ -0.88
Sssca1P56873 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Sssca1P56873 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sssca1P56873 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sssca1P56873 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sssca1P56873 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Sssca1P56873 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sssca1P56873 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sssca1P56873 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Sssca1P56873 Gm13875-201ENSMUST00000120162 282 ntBASIC9.54□□□□□ -0.88
Sssca1P56873 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sssca1P56873 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Sssca1P56873 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Sssca1P56873 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC9.54□□□□□ -0.88
Sssca1P56873 Gm25261-201ENSMUST00000157416 134 ntBASIC9.54□□□□□ -0.88
Sssca1P56873 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Sssca1P56873 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sssca1P56873 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Sssca1P56873 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Sssca1P56873 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Sssca1P56873 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC9.54□□□□□ -0.88
Sssca1P56873 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC9.54□□□□□ -0.88
Sssca1P56873 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sssca1P56873 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC9.54□□□□□ -0.88
Sssca1P56873 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sssca1P56873 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Sssca1P56873 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sssca1P56873 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sssca1P56873 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Sssca1P56873 Gm8420-201ENSMUST00000097103 598 ntBASIC9.54□□□□□ -0.88
Sssca1P56873 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sssca1P56873 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Sssca1P56873 Gm38140-201ENSMUST00000193617 2755 ntBASIC9.54□□□□□ -0.88
Sssca1P56873 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Sssca1P56873 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sssca1P56873 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sssca1P56873 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sssca1P56873 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Sssca1P56873 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sssca1P56873 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sssca1P56873 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sssca1P56873 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Sssca1P56873 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sssca1P56873 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sssca1P56873 Gm38055-201ENSMUST00000195353 2217 ntBASIC9.54□□□□□ -0.88
Sssca1P56873 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Sssca1P56873 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC9.53□□□□□ -0.88
Sssca1P56873 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Sssca1P56873 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Sssca1P56873 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Sssca1P56873 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Sssca1P56873 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Sssca1P56873 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Sssca1P56873 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 97.3 ms