Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.04□□□□□ -0.48
Ddx6P54823 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Ddx6P54823 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Ddx6P54823 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ddx6P54823 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ddx6P54823 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.04□□□□□ -0.48
Ddx6P54823 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ddx6P54823 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ddx6P54823 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Ddx6P54823 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ddx6P54823 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.04□□□□□ -0.48
Ddx6P54823 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.04□□□□□ -0.48
Ddx6P54823 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ddx6P54823 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Ddx6P54823 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ddx6P54823 Gm13182-201ENSMUST00000122241 312 ntBASIC12.04□□□□□ -0.48
Ddx6P54823 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ddx6P54823 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ddx6P54823 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC12.04□□□□□ -0.48
Ddx6P54823 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Ddx6P54823 Gm23153-201ENSMUST00000175323 313 ntBASIC12.04□□□□□ -0.48
Ddx6P54823 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ddx6P54823 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC12.04□□□□□ -0.48
Ddx6P54823 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC12.04□□□□□ -0.48
Ddx6P54823 Gm34023-201ENSMUST00000195539 217 ntBASIC12.04□□□□□ -0.48
Ddx6P54823 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC12.04□□□□□ -0.48
Ddx6P54823 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC12.04□□□□□ -0.48
Ddx6P54823 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC12.04□□□□□ -0.48
Ddx6P54823 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ddx6P54823 Gm4978-201ENSMUST00000071565 801 ntBASIC12.04□□□□□ -0.48
Ddx6P54823 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ddx6P54823 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Ddx6P54823 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ddx6P54823 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ddx6P54823 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ddx6P54823 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ddx6P54823 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ddx6P54823 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ddx6P54823 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ddx6P54823 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ddx6P54823 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ddx6P54823 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ddx6P54823 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.03□□□□□ -0.48
Ddx6P54823 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx6P54823 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
Ddx6P54823 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Ddx6P54823 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
Ddx6P54823 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Ddx6P54823 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx6P54823 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Ddx6P54823 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx6P54823 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx6P54823 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx6P54823 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx6P54823 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx6P54823 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.03□□□□□ -0.48
Ddx6P54823 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx6P54823 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx6P54823 Gm23272-201ENSMUST00000104053 129 ntBASIC12.03□□□□□ -0.48
Ddx6P54823 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Ddx6P54823 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx6P54823 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx6P54823 Gm12419-201ENSMUST00000116649 636 ntBASIC12.03□□□□□ -0.48
Ddx6P54823 Gm15615-201ENSMUST00000118876 198 ntBASIC12.03□□□□□ -0.48
Ddx6P54823 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx6P54823 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Ddx6P54823 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx6P54823 Gm18159-201ENSMUST00000174516 1070 ntBASIC12.03□□□□□ -0.48
Ddx6P54823 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx6P54823 Gm10731-201ENSMUST00000181171 448 ntBASIC12.03□□□□□ -0.48
Ddx6P54823 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx6P54823 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Ddx6P54823 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx6P54823 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx6P54823 Gm8574-201ENSMUST00000203207 924 ntBASIC12.03□□□□□ -0.48
Ddx6P54823 Gm8342-201ENSMUST00000209839 757 ntBASIC12.03□□□□□ -0.48
Ddx6P54823 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx6P54823 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx6P54823 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Ddx6P54823 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Ddx6P54823 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.03□□□□□ -0.48
Ddx6P54823 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx6P54823 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx6P54823 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx6P54823 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx6P54823 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC12.03□□□□□ -0.48
Ddx6P54823 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx6P54823 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx6P54823 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.03□□□□□ -0.48
Ddx6P54823 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.03□□□□□ -0.48
Ddx6P54823 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx6P54823 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx6P54823 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx6P54823 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx6P54823 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ddx6P54823 AC166836.1-201ENSMUST00000219933 1795 ntBASIC12.02□□□□□ -0.48
Ddx6P54823 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ddx6P54823 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ddx6P54823 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Ddx6P54823 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms