Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Atxn1P54254 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Atxn1P54254 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atxn1P54254 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Atxn1P54254 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC11.8□□□□□ -0.52
Atxn1P54254 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Atxn1P54254 Gm45594-201ENSMUST00000211717 241 ntBASIC11.8□□□□□ -0.52
Atxn1P54254 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atxn1P54254 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.8□□□□□ -0.52
Atxn1P54254 AC154257.1-202ENSMUST00000224729 843 ntBASIC11.8□□□□□ -0.52
Atxn1P54254 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atxn1P54254 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atxn1P54254 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atxn1P54254 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atxn1P54254 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atxn1P54254 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Atxn1P54254 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Atxn1P54254 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Atxn1P54254 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atxn1P54254 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.8□□□□□ -0.52
Atxn1P54254 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atxn1P54254 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atxn1P54254 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atxn1P54254 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Atxn1P54254 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atxn1P54254 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Atxn1P54254 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atxn1P54254 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atxn1P54254 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Atxn1P54254 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atxn1P54254 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Atxn1P54254 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atxn1P54254 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atxn1P54254 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Atxn1P54254 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC11.79□□□□□ -0.52
Atxn1P54254 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atxn1P54254 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atxn1P54254 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Atxn1P54254 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atxn1P54254 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atxn1P54254 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Atxn1P54254 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atxn1P54254 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Atxn1P54254 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atxn1P54254 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atxn1P54254 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.79□□□□□ -0.52
Atxn1P54254 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Atxn1P54254 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atxn1P54254 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atxn1P54254 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atxn1P54254 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atxn1P54254 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atxn1P54254 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atxn1P54254 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Atxn1P54254 Gm12783-201ENSMUST00000121425 397 ntBASIC11.79□□□□□ -0.52
Atxn1P54254 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC11.79□□□□□ -0.52
Atxn1P54254 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Atxn1P54254 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atxn1P54254 Ighv2-1-201ENSMUST00000170946 353 ntBASIC11.79□□□□□ -0.52
Atxn1P54254 Gm8343-201ENSMUST00000182705 994 ntBASIC11.79□□□□□ -0.52
Atxn1P54254 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Atxn1P54254 Gm9116-201ENSMUST00000192400 1018 ntBASIC11.79□□□□□ -0.52
Atxn1P54254 Gm5100-201ENSMUST00000195631 589 ntBASIC11.79□□□□□ -0.52
Atxn1P54254 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Atxn1P54254 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC11.79□□□□□ -0.52
Atxn1P54254 Gm44158-201ENSMUST00000203881 505 ntBASIC11.79□□□□□ -0.52
Atxn1P54254 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC11.79□□□□□ -0.52
Atxn1P54254 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.79□□□□□ -0.52
Atxn1P54254 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atxn1P54254 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC11.79□□□□□ -0.52
Atxn1P54254 CT009536.2-201ENSMUST00000225370 665 ntBASIC11.79□□□□□ -0.52
Atxn1P54254 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Atxn1P54254 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atxn1P54254 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atxn1P54254 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Atxn1P54254 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Atxn1P54254 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atxn1P54254 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Atxn1P54254 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atxn1P54254 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.79□□□□□ -0.52
Atxn1P54254 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atxn1P54254 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Atxn1P54254 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atxn1P54254 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atxn1P54254 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Atxn1P54254 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atxn1P54254 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atxn1P54254 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Atxn1P54254 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.78□□□□□ -0.52
Atxn1P54254 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atxn1P54254 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atxn1P54254 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.78□□□□□ -0.52
Atxn1P54254 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.78□□□□□ -0.52
Atxn1P54254 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Atxn1P54254 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atxn1P54254 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Atxn1P54254 Gm15784-201ENSMUST00000120260 1462 ntBASIC11.78□□□□□ -0.52
Atxn1P54254 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atxn1P54254 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atxn1P54254 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms