Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox1P53783 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Sox1P53783 Gm23132-201ENSMUST00000104254 132 ntBASIC12.12□□□□□ -0.47
Sox1P53783 Cdk1-202ENSMUST00000119827 1253 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Sox1P53783 Gm11244-201ENSMUST00000121243 237 ntBASIC12.12□□□□□ -0.47
Sox1P53783 Mir1905-201ENSMUST00000122779 82 ntBASIC12.12□□□□□ -0.47
Sox1P53783 Gm15886-201ENSMUST00000123155 1250 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sox1P53783 Gm13827-201ENSMUST00000148801 372 ntBASIC12.12□□□□□ -0.47
Sox1P53783 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sox1P53783 Ppy-202ENSMUST00000170554 487 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox1P53783 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC12.12□□□□□ -0.47
Sox1P53783 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox1P53783 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sox1P53783 Gm5267-201ENSMUST00000191574 1045 ntBASIC12.12□□□□□ -0.47
Sox1P53783 Ighv1-70-201ENSMUST00000196509 351 ntBASIC12.12□□□□□ -0.47
Sox1P53783 Gm43506-201ENSMUST00000200675 753 ntBASIC12.12□□□□□ -0.47
Sox1P53783 Gm6108-201ENSMUST00000208365 367 ntBASIC12.12□□□□□ -0.47
Sox1P53783 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.12□□□□□ -0.47
Sox1P53783 CT025603.1-201ENSMUST00000224040 448 ntBASIC12.12□□□□□ -0.47
Sox1P53783 AC174797.2-201ENSMUST00000225835 165 ntBASIC12.12□□□□□ -0.47
Sox1P53783 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox1P53783 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox1P53783 Cypt12-201ENSMUST00000029080 550 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Sox1P53783 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Sox1P53783 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox1P53783 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox1P53783 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sox1P53783 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox1P53783 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox1P53783 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox1P53783 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Sox1P53783 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox1P53783 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Sox1P53783 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox1P53783 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox1P53783 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Sox1P53783 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sox1P53783 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sox1P53783 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox1P53783 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sox1P53783 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox1P53783 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox1P53783 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox1P53783 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Sox1P53783 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox1P53783 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox1P53783 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sox1P53783 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sox1P53783 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox1P53783 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.11□□□□□ -0.47
Sox1P53783 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sox1P53783 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox1P53783 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sox1P53783 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox1P53783 Gm45251-201ENSMUST00000209486 1465 ntBASIC12.11□□□□□ -0.47
Sox1P53783 Tnnt3-213ENSMUST00000105952 1040 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox1P53783 Tnnt3-215ENSMUST00000105954 1052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox1P53783 Tnnt3-216ENSMUST00000105955 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox1P53783 Tnnt3-218ENSMUST00000105958 1050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox1P53783 Gm12418-201ENSMUST00000118116 942 ntBASIC12.11□□□□□ -0.47
Sox1P53783 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sox1P53783 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox1P53783 4930524O07Rik-202ENSMUST00000162334 293 ntTSL 2 BASIC12.11□□□□□ -0.47
Sox1P53783 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC12.11□□□□□ -0.47
Sox1P53783 Tnnt3-225ENSMUST00000179658 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox1P53783 Gm7430-201ENSMUST00000193824 1144 ntBASIC12.11□□□□□ -0.47
Sox1P53783 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Sox1P53783 Gm9487-201ENSMUST00000216600 472 ntBASIC12.11□□□□□ -0.47
Sox1P53783 Nqo2-203ENSMUST00000220844 957 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sox1P53783 CT009546.1-201ENSMUST00000222573 1120 ntBASIC12.11□□□□□ -0.47
Sox1P53783 CT009527.1-201ENSMUST00000224205 339 ntBASIC12.11□□□□□ -0.47
Sox1P53783 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox1P53783 Tnnt3-202ENSMUST00000078497 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox1P53783 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Sox1P53783 Fthl17e-201ENSMUST00000096509 841 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Sox1P53783 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox1P53783 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Sox1P53783 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.11□□□□□ -0.47
Sox1P53783 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Sox1P53783 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Sox1P53783 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox1P53783 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox1P53783 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Sox1P53783 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.1□□□□□ -0.47
Sox1P53783 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.1□□□□□ -0.47
Sox1P53783 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.1□□□□□ -0.47
Sox1P53783 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox1P53783 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sox1P53783 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sox1P53783 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox1P53783 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox1P53783 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox1P53783 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox1P53783 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Sox1P53783 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sox1P53783 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sox1P53783 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.1□□□□□ -0.47
Sox1P53783 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox1P53783 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox1P53783 Smok4a-201ENSMUST00000074512 1455 ntBASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms