Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Shmt1P50431 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Shmt1P50431 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC12.51□□□□□ -0.41
Shmt1P50431 Gm6114-201ENSMUST00000182472 968 ntBASIC12.51□□□□□ -0.41
Shmt1P50431 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC12.51□□□□□ -0.41
Shmt1P50431 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC12.51□□□□□ -0.41
Shmt1P50431 AC159819.2-201ENSMUST00000216151 342 ntBASIC12.51□□□□□ -0.41
Shmt1P50431 Ntng1-201ENSMUST00000051253 327 ntBASIC12.51□□□□□ -0.41
Shmt1P50431 Ginm1-202ENSMUST00000065124 300 ntBASIC12.51□□□□□ -0.41
Shmt1P50431 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Shmt1P50431 Gm5537-201ENSMUST00000091117 1252 ntBASIC12.51□□□□□ -0.41
Shmt1P50431 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Shmt1P50431 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Shmt1P50431 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Shmt1P50431 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Shmt1P50431 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Shmt1P50431 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Shmt1P50431 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Shmt1P50431 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Shmt1P50431 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Shmt1P50431 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.51□□□□□ -0.41
Shmt1P50431 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Shmt1P50431 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.51□□□□□ -0.41
Shmt1P50431 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Shmt1P50431 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Shmt1P50431 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Shmt1P50431 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Shmt1P50431 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Shmt1P50431 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Shmt1P50431 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Shmt1P50431 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Shmt1P50431 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shmt1P50431 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Shmt1P50431 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shmt1P50431 Gm43773-201ENSMUST00000198548 2162 ntBASIC12.5□□□□□ -0.41
Shmt1P50431 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Shmt1P50431 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shmt1P50431 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shmt1P50431 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shmt1P50431 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shmt1P50431 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shmt1P50431 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Shmt1P50431 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Shmt1P50431 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC12.5□□□□□ -0.41
Shmt1P50431 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Shmt1P50431 Gm13408-201ENSMUST00000119822 798 ntBASIC12.5□□□□□ -0.41
Shmt1P50431 Gm13935-201ENSMUST00000121859 798 ntBASIC12.5□□□□□ -0.41
Shmt1P50431 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC12.5□□□□□ -0.41
Shmt1P50431 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Shmt1P50431 Gm8815-201ENSMUST00000173809 620 ntBASIC12.5□□□□□ -0.41
Shmt1P50431 Gm28937-201ENSMUST00000185413 695 ntBASIC12.5□□□□□ -0.41
Shmt1P50431 Gm29400-201ENSMUST00000187208 695 ntBASIC12.5□□□□□ -0.41
Shmt1P50431 Gm28662-201ENSMUST00000188446 695 ntBASIC12.5□□□□□ -0.41
Shmt1P50431 Gm28251-201ENSMUST00000188835 695 ntBASIC12.5□□□□□ -0.41
Shmt1P50431 Gm37835-201ENSMUST00000193305 361 ntBASIC12.5□□□□□ -0.41
Shmt1P50431 Gm37318-201ENSMUST00000194325 695 ntBASIC12.5□□□□□ -0.41
Shmt1P50431 Gm38017-201ENSMUST00000194768 695 ntBASIC12.5□□□□□ -0.41
Shmt1P50431 Gm37287-201ENSMUST00000195449 695 ntBASIC12.5□□□□□ -0.41
Shmt1P50431 Gm37793-201ENSMUST00000195548 695 ntBASIC12.5□□□□□ -0.41
Shmt1P50431 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC12.5□□□□□ -0.41
Shmt1P50431 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shmt1P50431 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Shmt1P50431 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Shmt1P50431 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Shmt1P50431 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Shmt1P50431 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shmt1P50431 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Shmt1P50431 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shmt1P50431 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Shmt1P50431 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Shmt1P50431 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.5□□□□□ -0.41
Shmt1P50431 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shmt1P50431 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Shmt1P50431 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shmt1P50431 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shmt1P50431 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shmt1P50431 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Shmt1P50431 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.5□□□□□ -0.41
Shmt1P50431 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shmt1P50431 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Shmt1P50431 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Shmt1P50431 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Shmt1P50431 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Shmt1P50431 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Shmt1P50431 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Shmt1P50431 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Shmt1P50431 Gm5380-201ENSMUST00000119296 2136 ntBASIC12.49□□□□□ -0.41
Shmt1P50431 Gm8146-201ENSMUST00000192106 1847 ntBASIC12.49□□□□□ -0.41
Shmt1P50431 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.49□□□□□ -0.41
Shmt1P50431 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.49□□□□□ -0.41
Shmt1P50431 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Shmt1P50431 Gm9129-201ENSMUST00000218173 1689 ntBASIC12.49□□□□□ -0.41
Shmt1P50431 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Shmt1P50431 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Shmt1P50431 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC12.49□□□□□ -0.41
Shmt1P50431 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC12.49□□□□□ -0.41
Shmt1P50431 Gm15432-201ENSMUST00000121106 195 ntBASIC12.49□□□□□ -0.41
Shmt1P50431 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC12.49□□□□□ -0.41
Shmt1P50431 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Shmt1P50431 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms