Protein–RNA interactions for Protein: P48985

Atoh1, Protein atonal homolog 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atoh1P48985 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Atoh1P48985 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC13.34□□□□□ -0.27
Atoh1P48985 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Atoh1P48985 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Atoh1P48985 Gm5909-201ENSMUST00000119768 1281 ntBASIC13.34□□□□□ -0.27
Atoh1P48985 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC13.34□□□□□ -0.27
Atoh1P48985 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC13.34□□□□□ -0.27
Atoh1P48985 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Atoh1P48985 Gm16167-201ENSMUST00000160428 1065 ntBASIC13.34□□□□□ -0.27
Atoh1P48985 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Atoh1P48985 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Atoh1P48985 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Atoh1P48985 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Atoh1P48985 Gm4895-201ENSMUST00000181646 1137 ntBASIC13.34□□□□□ -0.27
Atoh1P48985 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Atoh1P48985 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC13.34□□□□□ -0.27
Atoh1P48985 Gm44953-201ENSMUST00000208745 1286 ntBASIC13.34□□□□□ -0.27
Atoh1P48985 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC13.34□□□□□ -0.27
Atoh1P48985 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Atoh1P48985 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Atoh1P48985 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Atoh1P48985 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Atoh1P48985 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Atoh1P48985 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Atoh1P48985 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Atoh1P48985 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Atoh1P48985 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Atoh1P48985 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.34□□□□□ -0.27
Atoh1P48985 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Atoh1P48985 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Atoh1P48985 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Atoh1P48985 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Atoh1P48985 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Atoh1P48985 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC13.34□□□□□ -0.27
Atoh1P48985 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Atoh1P48985 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Atoh1P48985 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Atoh1P48985 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Atoh1P48985 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Atoh1P48985 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Atoh1P48985 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atoh1P48985 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Atoh1P48985 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atoh1P48985 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atoh1P48985 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Atoh1P48985 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Atoh1P48985 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Atoh1P48985 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC13.33□□□□□ -0.28
Atoh1P48985 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Atoh1P48985 Gm15620-201ENSMUST00000122949 270 ntBASIC13.33□□□□□ -0.28
Atoh1P48985 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Atoh1P48985 Gm25830-201ENSMUST00000158923 132 ntBASIC13.33□□□□□ -0.28
Atoh1P48985 Gm16030-201ENSMUST00000159098 603 ntBASIC13.33□□□□□ -0.28
Atoh1P48985 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Atoh1P48985 Gm8197-202ENSMUST00000193422 934 ntBASIC13.33□□□□□ -0.28
Atoh1P48985 Gm43752-201ENSMUST00000198475 697 ntBASIC13.33□□□□□ -0.28
Atoh1P48985 Gm6855-201ENSMUST00000206307 790 ntBASIC13.33□□□□□ -0.28
Atoh1P48985 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Atoh1P48985 Arhgef33-207ENSMUST00000224966 490 ntBASIC13.33□□□□□ -0.28
Atoh1P48985 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Atoh1P48985 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Atoh1P48985 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC13.33□□□□□ -0.28
Atoh1P48985 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Atoh1P48985 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atoh1P48985 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
Atoh1P48985 Gm18210-201ENSMUST00000209001 1524 ntBASIC13.33□□□□□ -0.28
Atoh1P48985 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Atoh1P48985 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atoh1P48985 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC13.33□□□□□ -0.28
Atoh1P48985 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Atoh1P48985 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atoh1P48985 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Atoh1P48985 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atoh1P48985 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Atoh1P48985 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atoh1P48985 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atoh1P48985 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Atoh1P48985 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atoh1P48985 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atoh1P48985 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Atoh1P48985 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Atoh1P48985 Gm22594-201ENSMUST00000104251 130 ntBASIC13.32□□□□□ -0.28
Atoh1P48985 Gm12663-201ENSMUST00000118481 958 ntBASIC13.32□□□□□ -0.28
Atoh1P48985 Gm15549-201ENSMUST00000121595 622 ntBASIC13.32□□□□□ -0.28
Atoh1P48985 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC13.32□□□□□ -0.28
Atoh1P48985 Gm25492-201ENSMUST00000157383 129 ntBASIC13.32□□□□□ -0.28
Atoh1P48985 Gm17709-201ENSMUST00000174536 1096 ntBASIC13.32□□□□□ -0.28
Atoh1P48985 Gm6114-201ENSMUST00000182472 968 ntBASIC13.32□□□□□ -0.28
Atoh1P48985 Gm37852-201ENSMUST00000193027 350 ntBASIC13.32□□□□□ -0.28
Atoh1P48985 Trav11n-201ENSMUST00000200113 343 ntBASIC13.32□□□□□ -0.28
Atoh1P48985 Gm5340-201ENSMUST00000203733 880 ntBASIC13.32□□□□□ -0.28
Atoh1P48985 Gm18041-201ENSMUST00000218210 618 ntBASIC13.32□□□□□ -0.28
Atoh1P48985 AC134869.4-202ENSMUST00000224350 837 ntBASIC13.32□□□□□ -0.28
Atoh1P48985 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atoh1P48985 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Atoh1P48985 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atoh1P48985 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atoh1P48985 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atoh1P48985 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atoh1P48985 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms