Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC12.44□□□□□ -0.42
Rfx2P48379 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rfx2P48379 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rfx2P48379 AC159819.2-201ENSMUST00000216151 342 ntBASIC12.44□□□□□ -0.42
Rfx2P48379 Gm5369-201ENSMUST00000217499 588 ntBASIC12.44□□□□□ -0.42
Rfx2P48379 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rfx2P48379 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rfx2P48379 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Rfx2P48379 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rfx2P48379 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rfx2P48379 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rfx2P48379 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rfx2P48379 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rfx2P48379 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rfx2P48379 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rfx2P48379 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rfx2P48379 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rfx2P48379 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rfx2P48379 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.44□□□□□ -0.42
Rfx2P48379 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rfx2P48379 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rfx2P48379 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rfx2P48379 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
Rfx2P48379 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rfx2P48379 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rfx2P48379 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rfx2P48379 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.43□□□□□ -0.42
Rfx2P48379 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rfx2P48379 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rfx2P48379 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Rfx2P48379 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rfx2P48379 Gm13812-201ENSMUST00000118061 1347 ntBASIC12.43□□□□□ -0.42
Rfx2P48379 Gm13810-201ENSMUST00000118584 1347 ntBASIC12.43□□□□□ -0.42
Rfx2P48379 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.43□□□□□ -0.42
Rfx2P48379 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rfx2P48379 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rfx2P48379 Gm7722-201ENSMUST00000120646 741 ntBASIC12.43□□□□□ -0.42
Rfx2P48379 Gm15432-201ENSMUST00000121106 195 ntBASIC12.43□□□□□ -0.42
Rfx2P48379 n-R5s14-201ENSMUST00000122688 107 ntBASIC12.43□□□□□ -0.42
Rfx2P48379 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.43□□□□□ -0.42
Rfx2P48379 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC12.43□□□□□ -0.42
Rfx2P48379 Gm24514-201ENSMUST00000174961 285 ntBASIC12.43□□□□□ -0.42
Rfx2P48379 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rfx2P48379 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.43□□□□□ -0.42
Rfx2P48379 Gm44882-201ENSMUST00000205702 802 ntBASIC12.43□□□□□ -0.42
Rfx2P48379 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rfx2P48379 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC12.43□□□□□ -0.42
Rfx2P48379 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rfx2P48379 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rfx2P48379 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rfx2P48379 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rfx2P48379 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Rfx2P48379 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rfx2P48379 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rfx2P48379 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rfx2P48379 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rfx2P48379 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rfx2P48379 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rfx2P48379 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rfx2P48379 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rfx2P48379 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Rfx2P48379 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.43□□□□□ -0.42
Rfx2P48379 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rfx2P48379 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rfx2P48379 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rfx2P48379 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rfx2P48379 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rfx2P48379 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rfx2P48379 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.43□□□□□ -0.42
Rfx2P48379 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rfx2P48379 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rfx2P48379 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rfx2P48379 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rfx2P48379 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfx2P48379 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC12.42□□□□□ -0.42
Rfx2P48379 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.42□□□□□ -0.42
Rfx2P48379 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rfx2P48379 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfx2P48379 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfx2P48379 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rfx2P48379 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.42□□□□□ -0.42
Rfx2P48379 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Rfx2P48379 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfx2P48379 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfx2P48379 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rfx2P48379 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Rfx2P48379 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfx2P48379 Gm26286-201ENSMUST00000104166 134 ntBASIC12.42□□□□□ -0.42
Rfx2P48379 Gm14724-201ENSMUST00000118400 537 ntBASIC12.42□□□□□ -0.42
Rfx2P48379 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.42□□□□□ -0.42
Rfx2P48379 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rfx2P48379 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rfx2P48379 Gm8100-201ENSMUST00000182906 988 ntBASIC12.42□□□□□ -0.42
Rfx2P48379 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rfx2P48379 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC12.42□□□□□ -0.42
Rfx2P48379 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Rfx2P48379 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.42□□□□□ -0.42
Rfx2P48379 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC12.42□□□□□ -0.42
Rfx2P48379 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfx2P48379 Gm8956-201ENSMUST00000203939 825 ntBASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms