Protein–RNA interactions for Protein: P47708

Rph3a, Rabphilin-3A, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rph3aP47708 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rph3aP47708 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rph3aP47708 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rph3aP47708 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.5□□□□□ -0.57
Rph3aP47708 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.5□□□□□ -0.57
Rph3aP47708 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.5□□□□□ -0.57
Rph3aP47708 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.5□□□□□ -0.57
Rph3aP47708 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rph3aP47708 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rph3aP47708 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rph3aP47708 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.5□□□□□ -0.57
Rph3aP47708 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rph3aP47708 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rph3aP47708 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rph3aP47708 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rph3aP47708 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
Rph3aP47708 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.5□□□□□ -0.57
Rph3aP47708 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rph3aP47708 Gm42449-201ENSMUST00000200349 2258 ntBASIC11.49□□□□□ -0.57
Rph3aP47708 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.49□□□□□ -0.57
Rph3aP47708 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rph3aP47708 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rph3aP47708 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Rph3aP47708 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rph3aP47708 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rph3aP47708 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.49□□□□□ -0.57
Rph3aP47708 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Rph3aP47708 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.49□□□□□ -0.57
Rph3aP47708 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rph3aP47708 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Rph3aP47708 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rph3aP47708 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rph3aP47708 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rph3aP47708 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rph3aP47708 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rph3aP47708 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rph3aP47708 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rph3aP47708 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Rph3aP47708 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Rph3aP47708 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC11.49□□□□□ -0.57
Rph3aP47708 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Rph3aP47708 Gm25700-201ENSMUST00000177693 110 ntBASIC11.49□□□□□ -0.57
Rph3aP47708 Mir6420-201ENSMUST00000185032 102 ntBASIC11.49□□□□□ -0.57
Rph3aP47708 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.49□□□□□ -0.57
Rph3aP47708 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rph3aP47708 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.49□□□□□ -0.57
Rph3aP47708 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rph3aP47708 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rph3aP47708 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
Rph3aP47708 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rph3aP47708 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rph3aP47708 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rph3aP47708 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rph3aP47708 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Rph3aP47708 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rph3aP47708 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rph3aP47708 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Rph3aP47708 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rph3aP47708 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rph3aP47708 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.48□□□□□ -0.57
Rph3aP47708 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.48□□□□□ -0.57
Rph3aP47708 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.48□□□□□ -0.57
Rph3aP47708 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rph3aP47708 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Rph3aP47708 Gm16348-202ENSMUST00000146654 2385 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rph3aP47708 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rph3aP47708 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC11.48□□□□□ -0.57
Rph3aP47708 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rph3aP47708 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rph3aP47708 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rph3aP47708 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rph3aP47708 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rph3aP47708 Lrtm1-203ENSMUST00000224760 3060 ntBASIC11.48□□□□□ -0.57
Rph3aP47708 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
Rph3aP47708 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rph3aP47708 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rph3aP47708 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rph3aP47708 Gm5419-201ENSMUST00000119301 527 ntBASIC11.48□□□□□ -0.57
Rph3aP47708 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rph3aP47708 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rph3aP47708 Gm38241-201ENSMUST00000192641 898 ntBASIC11.48□□□□□ -0.57
Rph3aP47708 Gm5869-201ENSMUST00000200248 1257 ntBASIC11.48□□□□□ -0.57
Rph3aP47708 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC11.48□□□□□ -0.57
Rph3aP47708 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.48□□□□□ -0.57
Rph3aP47708 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rph3aP47708 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rph3aP47708 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rph3aP47708 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rph3aP47708 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Rph3aP47708 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rph3aP47708 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rph3aP47708 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rph3aP47708 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.48□□□□□ -0.57
Rph3aP47708 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rph3aP47708 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rph3aP47708 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rph3aP47708 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.48□□□□□ -0.57
Rph3aP47708 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rph3aP47708 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rph3aP47708 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms