Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Cep97-204ENSMUST00000121129 989 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sox18P43680 Gm13022-201ENSMUST00000121181 285 ntBASIC11.59□□□□□ -0.55
Sox18P43680 Gm5257-201ENSMUST00000121823 790 ntBASIC11.59□□□□□ -0.55
Sox18P43680 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC11.59□□□□□ -0.55
Sox18P43680 Gm7247-201ENSMUST00000162998 1157 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Sox18P43680 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC11.59□□□□□ -0.55
Sox18P43680 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox18P43680 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox18P43680 Gm18463-201ENSMUST00000207258 474 ntBASIC11.59□□□□□ -0.55
Sox18P43680 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.59□□□□□ -0.55
Sox18P43680 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sox18P43680 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.59□□□□□ -0.55
Sox18P43680 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sox18P43680 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Sox18P43680 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox18P43680 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Sox18P43680 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox18P43680 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox18P43680 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox18P43680 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox18P43680 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox18P43680 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sox18P43680 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.59□□□□□ -0.55
Sox18P43680 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox18P43680 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox18P43680 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.59□□□□□ -0.55
Sox18P43680 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox18P43680 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sox18P43680 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Sox18P43680 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.59□□□□□ -0.55
Sox18P43680 Glrb-206ENSMUST00000194085 1341 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sox18P43680 Gm6741-201ENSMUST00000057074 1330 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Sox18P43680 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Sox18P43680 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC11.58□□□□□ -0.55
Sox18P43680 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Sox18P43680 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.55
Sox18P43680 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Sox18P43680 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Sox18P43680 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox18P43680 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox18P43680 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Sox18P43680 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox18P43680 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox18P43680 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox18P43680 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox18P43680 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sox18P43680 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Sox18P43680 Tmsb15b1-201ENSMUST00000113071 439 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Sox18P43680 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC11.58□□□□□ -0.56
Sox18P43680 Gm11354-201ENSMUST00000121974 422 ntBASIC11.58□□□□□ -0.56
Sox18P43680 Gm12227-201ENSMUST00000147847 563 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sox18P43680 Gm8185-201ENSMUST00000160999 669 ntBASIC11.58□□□□□ -0.56
Sox18P43680 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC11.58□□□□□ -0.56
Sox18P43680 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC11.58□□□□□ -0.56
Sox18P43680 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox18P43680 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC11.58□□□□□ -0.56
Sox18P43680 Gm20854-202ENSMUST00000181549 1156 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Sox18P43680 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC11.58□□□□□ -0.56
Sox18P43680 Gm20812-202ENSMUST00000189550 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox18P43680 Gm43610-201ENSMUST00000199117 365 ntBASIC11.58□□□□□ -0.56
Sox18P43680 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.58□□□□□ -0.56
Sox18P43680 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sox18P43680 Gm18204-201ENSMUST00000209835 793 ntBASIC11.58□□□□□ -0.56
Sox18P43680 Gm19269-201ENSMUST00000211401 804 ntBASIC11.58□□□□□ -0.56
Sox18P43680 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sox18P43680 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.58□□□□□ -0.56
Sox18P43680 Gm3619-201ENSMUST00000219947 775 ntBASIC11.58□□□□□ -0.56
Sox18P43680 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC11.58□□□□□ -0.56
Sox18P43680 AC173482.2-201ENSMUST00000224044 750 ntBASIC11.58□□□□□ -0.56
Sox18P43680 Msmb-201ENSMUST00000022464 562 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox18P43680 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Sox18P43680 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox18P43680 Olfr510-201ENSMUST00000076289 945 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Sox18P43680 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox18P43680 Trappc3l-201ENSMUST00000095758 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox18P43680 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Sox18P43680 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox18P43680 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox18P43680 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sox18P43680 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox18P43680 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox18P43680 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox18P43680 Gm37859-201ENSMUST00000195529 2173 ntBASIC11.58□□□□□ -0.56
Sox18P43680 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC11.58□□□□□ -0.56
Sox18P43680 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sox18P43680 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox18P43680 Ssr1-203ENSMUST00000225246 1825 ntBASIC11.58□□□□□ -0.56
Sox18P43680 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox18P43680 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox18P43680 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox18P43680 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Sox18P43680 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sox18P43680 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox18P43680 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox18P43680 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox18P43680 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sox18P43680 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.57□□□□□ -0.56
Sox18P43680 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sox18P43680 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Sox18P43680 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms