Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Tnfsf4P43488 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
Tnfsf4P43488 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tnfsf4P43488 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tnfsf4P43488 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tnfsf4P43488 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tnfsf4P43488 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC11.41□□□□□ -0.58
Tnfsf4P43488 AC154404.1-201ENSMUST00000223601 2077 ntBASIC11.41□□□□□ -0.58
Tnfsf4P43488 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tnfsf4P43488 Gm14644-201ENSMUST00000116671 647 ntBASIC11.41□□□□□ -0.58
Tnfsf4P43488 Gm11989-201ENSMUST00000117240 672 ntBASIC11.41□□□□□ -0.58
Tnfsf4P43488 Gm11362-201ENSMUST00000118838 850 ntBASIC11.41□□□□□ -0.58
Tnfsf4P43488 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tnfsf4P43488 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Tnfsf4P43488 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Tnfsf4P43488 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.41□□□□□ -0.58
Tnfsf4P43488 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC11.41□□□□□ -0.58
Tnfsf4P43488 Gm9230-201ENSMUST00000188228 532 ntBASIC11.41□□□□□ -0.58
Tnfsf4P43488 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.41□□□□□ -0.58
Tnfsf4P43488 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.41□□□□□ -0.58
Tnfsf4P43488 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Tnfsf4P43488 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tnfsf4P43488 Gm10312-201ENSMUST00000078515 489 ntBASIC11.41□□□□□ -0.58
Tnfsf4P43488 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tnfsf4P43488 Gm38055-201ENSMUST00000195353 2217 ntBASIC11.41□□□□□ -0.58
Tnfsf4P43488 AC211878.3-201ENSMUST00000222629 2018 ntBASIC11.41□□□□□ -0.58
Tnfsf4P43488 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tnfsf4P43488 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Tnfsf4P43488 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tnfsf4P43488 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tnfsf4P43488 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tnfsf4P43488 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tnfsf4P43488 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.41□□□□□ -0.58
Tnfsf4P43488 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.41□□□□□ -0.58
Tnfsf4P43488 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tnfsf4P43488 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Tnfsf4P43488 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Tnfsf4P43488 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfsf4P43488 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfsf4P43488 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfsf4P43488 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.4□□□□□ -0.58
Tnfsf4P43488 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Tnfsf4P43488 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfsf4P43488 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfsf4P43488 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfsf4P43488 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfsf4P43488 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfsf4P43488 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfsf4P43488 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfsf4P43488 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfsf4P43488 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Tnfsf4P43488 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfsf4P43488 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfsf4P43488 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfsf4P43488 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfsf4P43488 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.4□□□□□ -0.58
Tnfsf4P43488 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfsf4P43488 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfsf4P43488 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Tnfsf4P43488 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Tnfsf4P43488 Gm26956-201ENSMUST00000182176 986 ntBASIC11.4□□□□□ -0.58
Tnfsf4P43488 Gm18187-201ENSMUST00000196476 984 ntBASIC11.4□□□□□ -0.58
Tnfsf4P43488 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfsf4P43488 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC11.4□□□□□ -0.58
Tnfsf4P43488 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.4□□□□□ -0.58
Tnfsf4P43488 Gm10608-202ENSMUST00000213924 676 ntBASIC11.4□□□□□ -0.58
Tnfsf4P43488 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Tnfsf4P43488 Gm8712-201ENSMUST00000221090 701 ntBASIC11.4□□□□□ -0.58
Tnfsf4P43488 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfsf4P43488 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfsf4P43488 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfsf4P43488 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.4□□□□□ -0.58
Tnfsf4P43488 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfsf4P43488 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfsf4P43488 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
Tnfsf4P43488 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Tnfsf4P43488 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Tnfsf4P43488 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Tnfsf4P43488 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
Tnfsf4P43488 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
Tnfsf4P43488 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfsf4P43488 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.39□□□□□ -0.59
Tnfsf4P43488 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.39□□□□□ -0.59
Tnfsf4P43488 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC11.39□□□□□ -0.59
Tnfsf4P43488 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfsf4P43488 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfsf4P43488 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfsf4P43488 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Tnfsf4P43488 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfsf4P43488 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
Tnfsf4P43488 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfsf4P43488 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfsf4P43488 Gm13297-201ENSMUST00000120205 934 ntBASIC11.39□□□□□ -0.59
Tnfsf4P43488 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfsf4P43488 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfsf4P43488 Gm9192-201ENSMUST00000183221 985 ntBASIC11.39□□□□□ -0.59
Tnfsf4P43488 Gm29396-201ENSMUST00000185659 716 ntBASIC11.39□□□□□ -0.59
Tnfsf4P43488 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC11.39□□□□□ -0.59
Tnfsf4P43488 Gm38114-201ENSMUST00000191877 1232 ntBASIC11.39□□□□□ -0.59
Tnfsf4P43488 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms