Protein–RNA interactions for Protein: P41778

Pbx1, Pre-B-cell leukemia transcription factor 1, mousemouse

Predictions only

Length 430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pbx1P41778 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pbx1P41778 Gm37122-201ENSMUST00000195313 1567 ntBASIC12.71□□□□□ -0.37
Pbx1P41778 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pbx1P41778 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pbx1P41778 Gm7642-201ENSMUST00000216345 1809 ntBASIC12.71□□□□□ -0.38
Pbx1P41778 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Pbx1P41778 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pbx1P41778 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pbx1P41778 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Pbx1P41778 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pbx1P41778 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pbx1P41778 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Pbx1P41778 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Pbx1P41778 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC12.71□□□□□ -0.38
Pbx1P41778 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pbx1P41778 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Pbx1P41778 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pbx1P41778 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pbx1P41778 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC12.7□□□□□ -0.38
Pbx1P41778 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.7□□□□□ -0.38
Pbx1P41778 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC12.7□□□□□ -0.38
Pbx1P41778 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pbx1P41778 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Pbx1P41778 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Pbx1P41778 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pbx1P41778 Gm11930-201ENSMUST00000117788 190 ntBASIC12.7□□□□□ -0.38
Pbx1P41778 Gm11222-201ENSMUST00000119005 738 ntBASIC12.7□□□□□ -0.38
Pbx1P41778 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pbx1P41778 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pbx1P41778 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.7□□□□□ -0.38
Pbx1P41778 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pbx1P41778 Mir8093-201ENSMUST00000185043 137 ntBASIC12.7□□□□□ -0.38
Pbx1P41778 Gm34767-201ENSMUST00000191813 1062 ntBASIC12.7□□□□□ -0.38
Pbx1P41778 Gm5982-201ENSMUST00000196234 512 ntBASIC12.7□□□□□ -0.38
Pbx1P41778 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pbx1P41778 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pbx1P41778 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pbx1P41778 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pbx1P41778 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.7□□□□□ -0.38
Pbx1P41778 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC12.7□□□□□ -0.38
Pbx1P41778 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pbx1P41778 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pbx1P41778 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pbx1P41778 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.7□□□□□ -0.38
Pbx1P41778 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pbx1P41778 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Pbx1P41778 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Pbx1P41778 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pbx1P41778 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pbx1P41778 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pbx1P41778 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pbx1P41778 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Pbx1P41778 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pbx1P41778 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC12.7□□□□□ -0.38
Pbx1P41778 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pbx1P41778 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pbx1P41778 Gm44573-201ENSMUST00000191753 2370 ntBASIC12.7□□□□□ -0.38
Pbx1P41778 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pbx1P41778 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pbx1P41778 AC154314.2-201ENSMUST00000223677 3502 ntBASIC12.7□□□□□ -0.38
Pbx1P41778 Gm5740-201ENSMUST00000211003 1857 ntBASIC12.7□□□□□ -0.38
Pbx1P41778 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pbx1P41778 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
Pbx1P41778 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pbx1P41778 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pbx1P41778 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pbx1P41778 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.69□□□□□ -0.38
Pbx1P41778 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pbx1P41778 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pbx1P41778 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Pbx1P41778 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pbx1P41778 Gm38089-201ENSMUST00000193585 1514 ntBASIC12.69□□□□□ -0.38
Pbx1P41778 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pbx1P41778 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pbx1P41778 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Pbx1P41778 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pbx1P41778 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pbx1P41778 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pbx1P41778 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pbx1P41778 Gm14726-201ENSMUST00000120623 896 ntBASIC12.69□□□□□ -0.38
Pbx1P41778 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.69□□□□□ -0.38
Pbx1P41778 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pbx1P41778 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pbx1P41778 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Pbx1P41778 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pbx1P41778 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pbx1P41778 Gm44415-201ENSMUST00000204151 2112 ntBASIC12.69□□□□□ -0.38
Pbx1P41778 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.69□□□□□ -0.38
Pbx1P41778 Gm18062-201ENSMUST00000208020 547 ntBASIC12.69□□□□□ -0.38
Pbx1P41778 Gm18055-201ENSMUST00000208254 547 ntBASIC12.69□□□□□ -0.38
Pbx1P41778 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pbx1P41778 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.69□□□□□ -0.38
Pbx1P41778 Gzmn-202ENSMUST00000225535 989 ntBASIC12.69□□□□□ -0.38
Pbx1P41778 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pbx1P41778 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pbx1P41778 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pbx1P41778 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Pbx1P41778 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC12.69□□□□□ -0.38
Pbx1P41778 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pbx1P41778 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms