Protein–RNA interactions for Protein: P41272

Cd27, CD27 antigen, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd27P41272 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Cd27P41272 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cd27P41272 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC9.52□□□□□ -0.89
Cd27P41272 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cd27P41272 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Cd27P41272 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cd27P41272 Gm7857-201ENSMUST00000117957 358 ntBASIC9.52□□□□□ -0.89
Cd27P41272 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC9.52□□□□□ -0.89
Cd27P41272 Gm12217-201ENSMUST00000118858 696 ntBASIC9.52□□□□□ -0.89
Cd27P41272 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cd27P41272 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC9.52□□□□□ -0.89
Cd27P41272 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC9.52□□□□□ -0.89
Cd27P41272 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC9.52□□□□□ -0.89
Cd27P41272 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cd27P41272 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Cd27P41272 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC9.52□□□□□ -0.89
Cd27P41272 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC9.52□□□□□ -0.89
Cd27P41272 Gm25732-201ENSMUST00000175168 60 ntBASIC9.52□□□□□ -0.89
Cd27P41272 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Cd27P41272 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Cd27P41272 Gm16505-201ENSMUST00000179981 232 ntBASIC9.52□□□□□ -0.89
Cd27P41272 Gm43184-201ENSMUST00000197247 542 ntBASIC9.52□□□□□ -0.89
Cd27P41272 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC9.52□□□□□ -0.89
Cd27P41272 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC9.52□□□□□ -0.89
Cd27P41272 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC9.52□□□□□ -0.89
Cd27P41272 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC9.52□□□□□ -0.89
Cd27P41272 AC211878.3-201ENSMUST00000222629 2018 ntBASIC9.52□□□□□ -0.89
Cd27P41272 Gm807-202ENSMUST00000224929 408 ntBASIC9.52□□□□□ -0.89
Cd27P41272 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cd27P41272 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cd27P41272 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cd27P41272 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cd27P41272 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cd27P41272 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC9.52□□□□□ -0.89
Cd27P41272 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cd27P41272 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cd27P41272 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Cd27P41272 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cd27P41272 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cd27P41272 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cd27P41272 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cd27P41272 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cd27P41272 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cd27P41272 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cd27P41272 Gm43289-201ENSMUST00000200537 1475 ntBASIC9.52□□□□□ -0.89
Cd27P41272 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Cd27P41272 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cd27P41272 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Cd27P41272 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC9.52□□□□□ -0.89
Cd27P41272 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Cd27P41272 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Cd27P41272 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Cd27P41272 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Cd27P41272 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cd27P41272 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Cd27P41272 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cd27P41272 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cd27P41272 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cd27P41272 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Cd27P41272 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Cd27P41272 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cd27P41272 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cd27P41272 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cd27P41272 AC091458.1-201ENSMUST00000220902 1361 ntBASIC9.51□□□□□ -0.89
Cd27P41272 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cd27P41272 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Cd27P41272 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cd27P41272 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cd27P41272 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cd27P41272 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC9.51□□□□□ -0.89
Cd27P41272 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
Cd27P41272 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cd27P41272 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cd27P41272 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cd27P41272 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC9.51□□□□□ -0.89
Cd27P41272 Gm11660-201ENSMUST00000120955 412 ntBASIC9.51□□□□□ -0.89
Cd27P41272 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Cd27P41272 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Cd27P41272 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Cd27P41272 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cd27P41272 H2-Q3-201ENSMUST00000172583 608 ntBASIC9.51□□□□□ -0.89
Cd27P41272 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Cd27P41272 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
Cd27P41272 Gm6114-201ENSMUST00000182472 968 ntBASIC9.51□□□□□ -0.89
Cd27P41272 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC9.51□□□□□ -0.89
Cd27P41272 Mir7677-201ENSMUST00000184226 67 ntBASIC9.51□□□□□ -0.89
Cd27P41272 Gm28686-201ENSMUST00000187404 609 ntBASIC9.51□□□□□ -0.89
Cd27P41272 Gm38117-201ENSMUST00000194653 939 ntBASIC9.51□□□□□ -0.89
Cd27P41272 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cd27P41272 AU022133-201ENSMUST00000200601 873 ntBASIC9.51□□□□□ -0.89
Cd27P41272 Rps4l-202ENSMUST00000204242 789 ntBASIC9.51□□□□□ -0.89
Cd27P41272 Gm18730-201ENSMUST00000218038 343 ntBASIC9.51□□□□□ -0.89
Cd27P41272 CT025694.1-201ENSMUST00000226188 934 ntBASIC9.51□□□□□ -0.89
Cd27P41272 AC133602.1-201ENSMUST00000227510 509 ntBASIC9.51□□□□□ -0.89
Cd27P41272 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cd27P41272 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cd27P41272 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Cd27P41272 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cd27P41272 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cd27P41272 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms