Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Sox5P35710 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox5P35710 Gm11793-201ENSMUST00000120433 981 ntBASIC12.9□□□□□ -0.34
Sox5P35710 Snora78-201ENSMUST00000158630 128 ntBASIC12.9□□□□□ -0.34
Sox5P35710 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Sox5P35710 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sox5P35710 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.9□□□□□ -0.34
Sox5P35710 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sox5P35710 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC12.9□□□□□ -0.34
Sox5P35710 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox5P35710 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox5P35710 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.9□□□□□ -0.34
Sox5P35710 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC12.9□□□□□ -0.34
Sox5P35710 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox5P35710 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox5P35710 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox5P35710 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox5P35710 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox5P35710 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox5P35710 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox5P35710 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox5P35710 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox5P35710 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sox5P35710 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Sox5P35710 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Sox5P35710 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Sox5P35710 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Sox5P35710 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
Sox5P35710 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox5P35710 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox5P35710 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC12.89□□□□□ -0.35
Sox5P35710 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox5P35710 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox5P35710 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Sox5P35710 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox5P35710 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Sox5P35710 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sox5P35710 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox5P35710 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox5P35710 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox5P35710 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.89□□□□□ -0.35
Sox5P35710 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sox5P35710 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox5P35710 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sox5P35710 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox5P35710 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Sox5P35710 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox5P35710 Gm12015-201ENSMUST00000117065 843 ntBASIC12.89□□□□□ -0.35
Sox5P35710 Gm13829-201ENSMUST00000119600 138 ntBASIC12.89□□□□□ -0.35
Sox5P35710 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sox5P35710 Gm9230-201ENSMUST00000188228 532 ntBASIC12.89□□□□□ -0.35
Sox5P35710 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sox5P35710 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox5P35710 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox5P35710 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox5P35710 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Sox5P35710 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox5P35710 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox5P35710 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox5P35710 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Sox5P35710 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox5P35710 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox5P35710 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox5P35710 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox5P35710 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox5P35710 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sox5P35710 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox5P35710 Erich3-203ENSMUST00000189969 3460 ntBASIC12.89□□□□□ -0.35
Sox5P35710 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox5P35710 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox5P35710 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox5P35710 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox5P35710 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox5P35710 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox5P35710 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox5P35710 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox5P35710 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sox5P35710 Gm15824-201ENSMUST00000119516 955 ntBASIC12.88□□□□□ -0.35
Sox5P35710 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sox5P35710 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sox5P35710 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.88□□□□□ -0.35
Sox5P35710 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox5P35710 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.88□□□□□ -0.35
Sox5P35710 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC12.88□□□□□ -0.35
Sox5P35710 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sox5P35710 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sox5P35710 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox5P35710 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox5P35710 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sox5P35710 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox5P35710 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sox5P35710 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox5P35710 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sox5P35710 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox5P35710 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox5P35710 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox5P35710 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox5P35710 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Sox5P35710 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sox5P35710 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms