Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Mmp3P28862 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Mmp3P28862 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Mmp3P28862 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Mmp3P28862 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.38
Mmp3P28862 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Mmp3P28862 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Mmp3P28862 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC12.65□□□□□ -0.38
Mmp3P28862 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Mmp3P28862 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Mmp3P28862 Gm26047-201ENSMUST00000157308 113 ntBASIC12.65□□□□□ -0.38
Mmp3P28862 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Mmp3P28862 Gm26047-202ENSMUST00000198840 115 ntBASIC12.65□□□□□ -0.38
Mmp3P28862 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC12.65□□□□□ -0.38
Mmp3P28862 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC12.65□□□□□ -0.38
Mmp3P28862 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC12.65□□□□□ -0.38
Mmp3P28862 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Mmp3P28862 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Mmp3P28862 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Mmp3P28862 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Mmp3P28862 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Mmp3P28862 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Mmp3P28862 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Mmp3P28862 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Mmp3P28862 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Mmp3P28862 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Mmp3P28862 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Mmp3P28862 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Mmp3P28862 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Mmp3P28862 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.65□□□□□ -0.39
Mmp3P28862 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Mmp3P28862 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Mmp3P28862 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Mmp3P28862 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.64□□□□□ -0.39
Mmp3P28862 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Mmp3P28862 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Mmp3P28862 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.64□□□□□ -0.39
Mmp3P28862 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.64□□□□□ -0.39
Mmp3P28862 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Mmp3P28862 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Mmp3P28862 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC12.64□□□□□ -0.39
Mmp3P28862 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Mmp3P28862 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.64□□□□□ -0.39
Mmp3P28862 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC12.64□□□□□ -0.39
Mmp3P28862 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Mmp3P28862 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Mmp3P28862 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Mmp3P28862 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Mmp3P28862 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Mmp3P28862 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.64□□□□□ -0.39
Mmp3P28862 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Mmp3P28862 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Mmp3P28862 Gm12899-201ENSMUST00000120565 551 ntBASIC12.64□□□□□ -0.39
Mmp3P28862 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC12.64□□□□□ -0.39
Mmp3P28862 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.64□□□□□ -0.39
Mmp3P28862 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC12.64□□□□□ -0.39
Mmp3P28862 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Mmp3P28862 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Mmp3P28862 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Mmp3P28862 Gm37981-201ENSMUST00000194280 535 ntBASIC12.64□□□□□ -0.39
Mmp3P28862 Gm8574-201ENSMUST00000203207 924 ntBASIC12.64□□□□□ -0.39
Mmp3P28862 Gm7600-201ENSMUST00000209657 785 ntBASIC12.64□□□□□ -0.39
Mmp3P28862 Gm8342-201ENSMUST00000209839 757 ntBASIC12.64□□□□□ -0.39
Mmp3P28862 AC154257.1-202ENSMUST00000224729 843 ntBASIC12.64□□□□□ -0.39
Mmp3P28862 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Mmp3P28862 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Mmp3P28862 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Mmp3P28862 Gm13347-201ENSMUST00000120298 1353 ntBASIC12.64□□□□□ -0.39
Mmp3P28862 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Mmp3P28862 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Mmp3P28862 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Mmp3P28862 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Mmp3P28862 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Mmp3P28862 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Mmp3P28862 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Mmp3P28862 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Mmp3P28862 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Mmp3P28862 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Mmp3P28862 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Mmp3P28862 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Mmp3P28862 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.63□□□□□ -0.39
Mmp3P28862 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Mmp3P28862 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.63□□□□□ -0.39
Mmp3P28862 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Mmp3P28862 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC12.63□□□□□ -0.39
Mmp3P28862 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC12.63□□□□□ -0.39
Mmp3P28862 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Mmp3P28862 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Mmp3P28862 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC12.63□□□□□ -0.39
Mmp3P28862 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Mmp3P28862 Gm9661-201ENSMUST00000221611 1122 ntBASIC12.63□□□□□ -0.39
Mmp3P28862 AC165260.2-203ENSMUST00000224237 336 ntBASIC12.63□□□□□ -0.39
Mmp3P28862 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Mmp3P28862 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Mmp3P28862 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Mmp3P28862 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Mmp3P28862 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Mmp3P28862 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Mmp3P28862 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Mmp3P28862 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms