Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nckap1P28660 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nckap1P28660 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nckap1P28660 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nckap1P28660 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.82□□□□□ -0.52
Nckap1P28660 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Nckap1P28660 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC11.82□□□□□ -0.52
Nckap1P28660 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nckap1P28660 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Nckap1P28660 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Nckap1P28660 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nckap1P28660 Gm11667-201ENSMUST00000119828 486 ntBASIC11.82□□□□□ -0.52
Nckap1P28660 Gm8737-201ENSMUST00000122208 642 ntBASIC11.82□□□□□ -0.52
Nckap1P28660 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nckap1P28660 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.82□□□□□ -0.52
Nckap1P28660 Gm27438-201ENSMUST00000183480 110 ntBASIC11.82□□□□□ -0.52
Nckap1P28660 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nckap1P28660 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nckap1P28660 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC11.82□□□□□ -0.52
Nckap1P28660 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC11.82□□□□□ -0.52
Nckap1P28660 Gm17931-201ENSMUST00000208132 634 ntBASIC11.82□□□□□ -0.52
Nckap1P28660 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nckap1P28660 Gm18974-201ENSMUST00000221478 1031 ntBASIC11.82□□□□□ -0.52
Nckap1P28660 AC171241.1-201ENSMUST00000228144 1166 ntBASIC11.82□□□□□ -0.52
Nckap1P28660 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nckap1P28660 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Nckap1P28660 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nckap1P28660 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nckap1P28660 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Nckap1P28660 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nckap1P28660 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nckap1P28660 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nckap1P28660 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nckap1P28660 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nckap1P28660 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nckap1P28660 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nckap1P28660 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nckap1P28660 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Nckap1P28660 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nckap1P28660 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Nckap1P28660 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nckap1P28660 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nckap1P28660 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Nckap1P28660 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nckap1P28660 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.81□□□□□ -0.52
Nckap1P28660 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nckap1P28660 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
Nckap1P28660 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Nckap1P28660 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Nckap1P28660 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Nckap1P28660 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nckap1P28660 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Nckap1P28660 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nckap1P28660 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nckap1P28660 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nckap1P28660 Gm14193-201ENSMUST00000105067 153 ntBASIC11.81□□□□□ -0.52
Nckap1P28660 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
Nckap1P28660 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC11.81□□□□□ -0.52
Nckap1P28660 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nckap1P28660 Gm4310-201ENSMUST00000177847 889 ntBASIC11.81□□□□□ -0.52
Nckap1P28660 Gm5714-201ENSMUST00000197343 566 ntBASIC11.81□□□□□ -0.52
Nckap1P28660 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC11.81□□□□□ -0.52
Nckap1P28660 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Nckap1P28660 Gm44551-201ENSMUST00000208804 171 ntBASIC11.81□□□□□ -0.52
Nckap1P28660 CT485607.1-201ENSMUST00000216100 85 ntBASIC11.81□□□□□ -0.52
Nckap1P28660 Gm4797-201ENSMUST00000219075 1283 ntBASIC11.81□□□□□ -0.52
Nckap1P28660 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nckap1P28660 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nckap1P28660 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nckap1P28660 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Nckap1P28660 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nckap1P28660 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Nckap1P28660 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nckap1P28660 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nckap1P28660 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nckap1P28660 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nckap1P28660 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Nckap1P28660 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nckap1P28660 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nckap1P28660 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nckap1P28660 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nckap1P28660 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nckap1P28660 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nckap1P28660 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nckap1P28660 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nckap1P28660 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Nckap1P28660 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nckap1P28660 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nckap1P28660 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nckap1P28660 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nckap1P28660 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.8□□□□□ -0.52
Nckap1P28660 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nckap1P28660 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nckap1P28660 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nckap1P28660 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nckap1P28660 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.8□□□□□ -0.52
Nckap1P28660 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nckap1P28660 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nckap1P28660 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nckap1P28660 Gm13910-201ENSMUST00000121752 1428 ntBASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms