Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Hoxd8P23463 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxd8P23463 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxd8P23463 Gm4900-201ENSMUST00000222046 1628 ntBASIC12.26□□□□□ -0.45
Hoxd8P23463 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxd8P23463 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxd8P23463 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
Hoxd8P23463 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxd8P23463 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxd8P23463 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.26□□□□□ -0.45
Hoxd8P23463 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.26□□□□□ -0.45
Hoxd8P23463 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxd8P23463 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC12.26□□□□□ -0.45
Hoxd8P23463 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Hoxd8P23463 Gm14539-201ENSMUST00000117527 174 ntBASIC12.26□□□□□ -0.45
Hoxd8P23463 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC12.26□□□□□ -0.45
Hoxd8P23463 Gm12969-201ENSMUST00000120199 1004 ntBASIC12.26□□□□□ -0.45
Hoxd8P23463 Gm14395-201ENSMUST00000120494 563 ntBASIC12.26□□□□□ -0.45
Hoxd8P23463 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxd8P23463 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Hoxd8P23463 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC12.26□□□□□ -0.45
Hoxd8P23463 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxd8P23463 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Hoxd8P23463 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxd8P23463 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxd8P23463 Gm43752-201ENSMUST00000198475 697 ntBASIC12.26□□□□□ -0.45
Hoxd8P23463 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC12.26□□□□□ -0.45
Hoxd8P23463 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC12.26□□□□□ -0.45
Hoxd8P23463 Gm23105-201ENSMUST00000083719 134 ntBASIC12.26□□□□□ -0.45
Hoxd8P23463 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Hoxd8P23463 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxd8P23463 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxd8P23463 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxd8P23463 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxd8P23463 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Hoxd8P23463 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.26□□□□□ -0.45
Hoxd8P23463 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.26□□□□□ -0.45
Hoxd8P23463 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxd8P23463 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Hoxd8P23463 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxd8P23463 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxd8P23463 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxd8P23463 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxd8P23463 Gm38089-201ENSMUST00000193585 1514 ntBASIC12.26□□□□□ -0.45
Hoxd8P23463 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Hoxd8P23463 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxd8P23463 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxd8P23463 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxd8P23463 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxd8P23463 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxd8P23463 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxd8P23463 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Hoxd8P23463 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxd8P23463 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Hoxd8P23463 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC12.25□□□□□ -0.45
Hoxd8P23463 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxd8P23463 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Hoxd8P23463 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxd8P23463 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC12.25□□□□□ -0.45
Hoxd8P23463 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxd8P23463 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC12.25□□□□□ -0.45
Hoxd8P23463 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxd8P23463 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxd8P23463 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Hoxd8P23463 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Hoxd8P23463 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Hoxd8P23463 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Hoxd8P23463 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Hoxd8P23463 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Hoxd8P23463 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Hoxd8P23463 Gm7741-201ENSMUST00000181445 989 ntBASIC12.25□□□□□ -0.45
Hoxd8P23463 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.25□□□□□ -0.45
Hoxd8P23463 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxd8P23463 Gm5100-201ENSMUST00000195631 589 ntBASIC12.25□□□□□ -0.45
Hoxd8P23463 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC12.25□□□□□ -0.45
Hoxd8P23463 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxd8P23463 Gm45594-201ENSMUST00000211717 241 ntBASIC12.25□□□□□ -0.45
Hoxd8P23463 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Hoxd8P23463 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxd8P23463 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Hoxd8P23463 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.25□□□□□ -0.45
Hoxd8P23463 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxd8P23463 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxd8P23463 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxd8P23463 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxd8P23463 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxd8P23463 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.25□□□□□ -0.45
Hoxd8P23463 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxd8P23463 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxd8P23463 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxd8P23463 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Hoxd8P23463 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxd8P23463 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxd8P23463 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.24□□□□□ -0.45
Hoxd8P23463 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxd8P23463 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.24□□□□□ -0.45
Hoxd8P23463 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC12.24□□□□□ -0.45
Hoxd8P23463 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Hoxd8P23463 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxd8P23463 Gm12247-201ENSMUST00000117585 670 ntBASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms