Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Sdc1P18828 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Sdc1P18828 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
Sdc1P18828 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Sdc1P18828 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Sdc1P18828 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Sdc1P18828 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Sdc1P18828 Gm35850-202ENSMUST00000211705 2120 ntBASIC9.65□□□□□ -0.86
Sdc1P18828 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Sdc1P18828 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Sdc1P18828 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Sdc1P18828 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Sdc1P18828 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Sdc1P18828 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC9.65□□□□□ -0.86
Sdc1P18828 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Sdc1P18828 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC9.65□□□□□ -0.86
Sdc1P18828 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC9.65□□□□□ -0.86
Sdc1P18828 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Sdc1P18828 Gm42602-201ENSMUST00000200288 3224 ntBASIC9.65□□□□□ -0.86
Sdc1P18828 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Sdc1P18828 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Sdc1P18828 Gm16479-201ENSMUST00000121706 932 ntBASIC9.65□□□□□ -0.86
Sdc1P18828 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC9.65□□□□□ -0.86
Sdc1P18828 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC9.65□□□□□ -0.86
Sdc1P18828 Gm26185-201ENSMUST00000157692 266 ntBASIC9.65□□□□□ -0.86
Sdc1P18828 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Sdc1P18828 Gm42693-201ENSMUST00000196779 631 ntBASIC9.65□□□□□ -0.86
Sdc1P18828 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Sdc1P18828 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Sdc1P18828 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC9.65□□□□□ -0.86
Sdc1P18828 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Sdc1P18828 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Sdc1P18828 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Sdc1P18828 n-R5s77-201ENSMUST00000083757 119 ntBASIC9.65□□□□□ -0.86
Sdc1P18828 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Sdc1P18828 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Sdc1P18828 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Sdc1P18828 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Sdc1P18828 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Sdc1P18828 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.87
Sdc1P18828 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Sdc1P18828 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.87
Sdc1P18828 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Sdc1P18828 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC9.65□□□□□ -0.87
Sdc1P18828 AC154527.2-201ENSMUST00000225256 1466 ntBASIC9.65□□□□□ -0.87
Sdc1P18828 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC9.65□□□□□ -0.87
Sdc1P18828 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Sdc1P18828 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Sdc1P18828 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Sdc1P18828 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Sdc1P18828 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Sdc1P18828 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Sdc1P18828 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Sdc1P18828 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Sdc1P18828 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Sdc1P18828 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Sdc1P18828 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Sdc1P18828 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Sdc1P18828 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Sdc1P18828 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Sdc1P18828 Erich3-203ENSMUST00000189969 3460 ntBASIC9.64□□□□□ -0.87
Sdc1P18828 Gm10699-201ENSMUST00000098916 2130 ntBASIC9.64□□□□□ -0.87
Sdc1P18828 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Sdc1P18828 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Sdc1P18828 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Sdc1P18828 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Sdc1P18828 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Sdc1P18828 AC169511.2-201ENSMUST00000226674 2063 ntBASIC9.64□□□□□ -0.87
Sdc1P18828 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Sdc1P18828 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Sdc1P18828 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Sdc1P18828 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Sdc1P18828 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC9.64□□□□□ -0.87
Sdc1P18828 Gm23912-201ENSMUST00000104687 87 ntBASIC9.64□□□□□ -0.87
Sdc1P18828 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC9.64□□□□□ -0.87
Sdc1P18828 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC9.64□□□□□ -0.87
Sdc1P18828 Gm4995-201ENSMUST00000117247 432 ntBASIC9.64□□□□□ -0.87
Sdc1P18828 Gm11700-201ENSMUST00000119409 403 ntBASIC9.64□□□□□ -0.87
Sdc1P18828 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC9.64□□□□□ -0.87
Sdc1P18828 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC9.64□□□□□ -0.87
Sdc1P18828 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Sdc1P18828 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Sdc1P18828 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Sdc1P18828 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Sdc1P18828 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC9.64□□□□□ -0.87
Sdc1P18828 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Sdc1P18828 Gm28760-201ENSMUST00000185995 736 ntBASIC9.64□□□□□ -0.87
Sdc1P18828 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC9.64□□□□□ -0.87
Sdc1P18828 Gm5896-201ENSMUST00000189662 1024 ntBASIC9.64□□□□□ -0.87
Sdc1P18828 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Sdc1P18828 Gm38092-201ENSMUST00000195600 653 ntBASIC9.64□□□□□ -0.87
Sdc1P18828 Gm18473-201ENSMUST00000220543 868 ntBASIC9.64□□□□□ -0.87
Sdc1P18828 AC134254.1-201ENSMUST00000221362 167 ntBASIC9.64□□□□□ -0.87
Sdc1P18828 AC126253.1-202ENSMUST00000226732 835 ntBASIC9.64□□□□□ -0.87
Sdc1P18828 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Sdc1P18828 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Sdc1P18828 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Sdc1P18828 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC9.64□□□□□ -0.87
Sdc1P18828 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Sdc1P18828 Gm18806-201ENSMUST00000207607 1775 ntBASIC9.64□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms