Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc8P09025 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc8P09025 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc8P09025 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC12.53□□□□□ -0.4
Hoxc8P09025 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC12.53□□□□□ -0.4
Hoxc8P09025 Gm8723-201ENSMUST00000166076 820 ntBASIC12.53□□□□□ -0.4
Hoxc8P09025 Gm8701-201ENSMUST00000169259 874 ntBASIC12.53□□□□□ -0.4
Hoxc8P09025 Ighv2-1-201ENSMUST00000170946 353 ntBASIC12.53□□□□□ -0.4
Hoxc8P09025 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC12.53□□□□□ -0.4
Hoxc8P09025 Gm4895-201ENSMUST00000181646 1137 ntBASIC12.53□□□□□ -0.4
Hoxc8P09025 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Hoxc8P09025 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC12.53□□□□□ -0.4
Hoxc8P09025 Gm9111-201ENSMUST00000219394 709 ntBASIC12.53□□□□□ -0.4
Hoxc8P09025 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Hoxc8P09025 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Hoxc8P09025 Mir483-201ENSMUST00000093631 73 ntBASIC12.53□□□□□ -0.4
Hoxc8P09025 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.53□□□□□ -0.4
Hoxc8P09025 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc8P09025 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc8P09025 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc8P09025 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc8P09025 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Hoxc8P09025 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc8P09025 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc8P09025 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc8P09025 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.53□□□□□ -0.4
Hoxc8P09025 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc8P09025 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc8P09025 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc8P09025 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc8P09025 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Hoxc8P09025 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxc8P09025 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxc8P09025 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxc8P09025 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxc8P09025 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
Hoxc8P09025 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.4
Hoxc8P09025 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Hoxc8P09025 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxc8P09025 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxc8P09025 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxc8P09025 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc8P09025 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.52□□□□□ -0.41
Hoxc8P09025 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc8P09025 Gm13549-201ENSMUST00000118339 796 ntBASIC12.52□□□□□ -0.41
Hoxc8P09025 Gm14740-201ENSMUST00000118538 1150 ntBASIC12.52□□□□□ -0.41
Hoxc8P09025 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC12.52□□□□□ -0.41
Hoxc8P09025 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc8P09025 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC12.52□□□□□ -0.41
Hoxc8P09025 Gm18776-201ENSMUST00000188833 654 ntBASIC12.52□□□□□ -0.41
Hoxc8P09025 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Hoxc8P09025 Gm7082-201ENSMUST00000209880 969 ntBASIC12.52□□□□□ -0.41
Hoxc8P09025 Gm35713-201ENSMUST00000210516 199 ntBASIC12.52□□□□□ -0.41
Hoxc8P09025 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC12.52□□□□□ -0.41
Hoxc8P09025 AC134248.1-201ENSMUST00000216113 1176 ntBASIC12.52□□□□□ -0.41
Hoxc8P09025 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc8P09025 Gm43334-201ENSMUST00000197740 1318 ntBASIC12.52□□□□□ -0.41
Hoxc8P09025 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.52□□□□□ -0.41
Hoxc8P09025 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc8P09025 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc8P09025 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc8P09025 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc8P09025 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Hoxc8P09025 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc8P09025 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc8P09025 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc8P09025 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc8P09025 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.52□□□□□ -0.41
Hoxc8P09025 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc8P09025 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc8P09025 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc8P09025 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc8P09025 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc8P09025 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc8P09025 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Hoxc8P09025 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc8P09025 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc8P09025 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.51□□□□□ -0.41
Hoxc8P09025 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.51□□□□□ -0.41
Hoxc8P09025 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc8P09025 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
Hoxc8P09025 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc8P09025 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Hoxc8P09025 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc8P09025 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Hoxc8P09025 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc8P09025 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.51□□□□□ -0.41
Hoxc8P09025 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc8P09025 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Hoxc8P09025 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc8P09025 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC12.51□□□□□ -0.41
Hoxc8P09025 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc8P09025 Gm12816-201ENSMUST00000118069 1212 ntBASIC12.51□□□□□ -0.41
Hoxc8P09025 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc8P09025 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc8P09025 Gm37638-201ENSMUST00000194337 1123 ntBASIC12.51□□□□□ -0.41
Hoxc8P09025 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc8P09025 Gm18463-201ENSMUST00000207258 474 ntBASIC12.51□□□□□ -0.41
Hoxc8P09025 Gm18460-201ENSMUST00000208088 464 ntBASIC12.51□□□□□ -0.41
Hoxc8P09025 AC122891.1-201ENSMUST00000218671 268 ntBASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms