Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Gm12015-201ENSMUST00000117065 843 ntBASIC11.37□□□□□ -0.59
Hcn1O88704 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC11.37□□□□□ -0.59
Hcn1O88704 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hcn1O88704 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hcn1O88704 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hcn1O88704 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hcn1O88704 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.37□□□□□ -0.59
Hcn1O88704 Gm4819-201ENSMUST00000182170 1009 ntBASIC11.37□□□□□ -0.59
Hcn1O88704 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hcn1O88704 Gm5869-201ENSMUST00000200248 1257 ntBASIC11.37□□□□□ -0.59
Hcn1O88704 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC11.37□□□□□ -0.59
Hcn1O88704 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC11.37□□□□□ -0.59
Hcn1O88704 Gm45691-201ENSMUST00000206905 1120 ntBASIC11.37□□□□□ -0.59
Hcn1O88704 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.37□□□□□ -0.59
Hcn1O88704 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC11.37□□□□□ -0.59
Hcn1O88704 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC11.37□□□□□ -0.59
Hcn1O88704 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Hcn1O88704 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC11.37□□□□□ -0.59
Hcn1O88704 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC11.37□□□□□ -0.59
Hcn1O88704 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hcn1O88704 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.37□□□□□ -0.59
Hcn1O88704 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hcn1O88704 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hcn1O88704 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hcn1O88704 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Hcn1O88704 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Hcn1O88704 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hcn1O88704 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11.37□□□□□ -0.59
Hcn1O88704 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hcn1O88704 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hcn1O88704 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hcn1O88704 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.37□□□□□ -0.59
Hcn1O88704 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC11.37□□□□□ -0.59
Hcn1O88704 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hcn1O88704 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hcn1O88704 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC11.37□□□□□ -0.59
Hcn1O88704 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
Hcn1O88704 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hcn1O88704 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.36□□□□□ -0.59
Hcn1O88704 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hcn1O88704 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.36□□□□□ -0.59
Hcn1O88704 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hcn1O88704 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hcn1O88704 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Hcn1O88704 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hcn1O88704 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hcn1O88704 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.36□□□□□ -0.59
Hcn1O88704 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hcn1O88704 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.36□□□□□ -0.59
Hcn1O88704 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Hcn1O88704 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hcn1O88704 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Hcn1O88704 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hcn1O88704 AC154404.1-201ENSMUST00000223601 2077 ntBASIC11.36□□□□□ -0.59
Hcn1O88704 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hcn1O88704 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hcn1O88704 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hcn1O88704 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hcn1O88704 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Hcn1O88704 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC11.36□□□□□ -0.59
Hcn1O88704 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Hcn1O88704 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Hcn1O88704 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.36□□□□□ -0.59
Hcn1O88704 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC11.36□□□□□ -0.59
Hcn1O88704 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC11.36□□□□□ -0.59
Hcn1O88704 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC11.36□□□□□ -0.59
Hcn1O88704 Gzmn-202ENSMUST00000225535 989 ntBASIC11.36□□□□□ -0.59
Hcn1O88704 AC093022.1-201ENSMUST00000226949 1072 ntBASIC11.36□□□□□ -0.59
Hcn1O88704 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Hcn1O88704 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hcn1O88704 Gm36957-201ENSMUST00000192982 2824 ntBASIC11.36□□□□□ -0.59
Hcn1O88704 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Hcn1O88704 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Hcn1O88704 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Hcn1O88704 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
Hcn1O88704 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hcn1O88704 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Hcn1O88704 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hcn1O88704 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hcn1O88704 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Hcn1O88704 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hcn1O88704 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.36□□□□□ -0.59
Hcn1O88704 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hcn1O88704 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC11.36□□□□□ -0.59
Hcn1O88704 AC124577.2-201ENSMUST00000217413 2420 ntBASIC11.36□□□□□ -0.59
Hcn1O88704 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hcn1O88704 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.36□□□□□ -0.59
Hcn1O88704 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Hcn1O88704 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hcn1O88704 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hcn1O88704 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hcn1O88704 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hcn1O88704 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hcn1O88704 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Hcn1O88704 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hcn1O88704 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hcn1O88704 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hcn1O88704 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hcn1O88704 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hcn1O88704 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms