Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Gm9487-201ENSMUST00000216600 472 ntBASIC15.08■□□□□ 0.01
Ubr1O70481 Id2-203ENSMUST00000222667 958 ntBASIC15.08■□□□□ 0.01
Ubr1O70481 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ubr1O70481 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ubr1O70481 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ubr1O70481 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ubr1O70481 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC15.08■□□□□ 0
Ubr1O70481 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Ubr1O70481 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ubr1O70481 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ubr1O70481 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ubr1O70481 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Ubr1O70481 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ubr1O70481 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ubr1O70481 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Ubr1O70481 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ubr1O70481 Gm17889-201ENSMUST00000198410 598 ntBASIC15.08■□□□□ 0
Ubr1O70481 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ubr1O70481 Gm45500-201ENSMUST00000211676 803 ntBASIC15.08■□□□□ 0
Ubr1O70481 AC122024.3-201ENSMUST00000217719 294 ntBASIC15.08■□□□□ 0
Ubr1O70481 Capsl-202ENSMUST00000226688 739 ntBASIC15.08■□□□□ 0
Ubr1O70481 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC15.08■□□□□ 0
Ubr1O70481 CT010447.1-201ENSMUST00000225657 1608 ntBASIC15.08■□□□□ 0
Ubr1O70481 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ubr1O70481 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC15.08■□□□□ 0
Ubr1O70481 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ubr1O70481 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Ubr1O70481 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ubr1O70481 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Ubr1O70481 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
Ubr1O70481 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
Ubr1O70481 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Ubr1O70481 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC15.07■□□□□ 0
Ubr1O70481 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.07■□□□□ 0
Ubr1O70481 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC15.07■□□□□ 0
Ubr1O70481 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ubr1O70481 Gm3836-201ENSMUST00000211377 1613 ntBASIC15.07■□□□□ 0
Ubr1O70481 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Ubr1O70481 Gm14398-201ENSMUST00000117287 1073 ntBASIC15.07■□□□□ 0
Ubr1O70481 Gm15036-201ENSMUST00000118880 400 ntBASIC15.07■□□□□ 0
Ubr1O70481 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC15.07■□□□□ 0
Ubr1O70481 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ubr1O70481 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC15.07■□□□□ 0
Ubr1O70481 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC15.07■□□□□ 0
Ubr1O70481 AC159376.1-201ENSMUST00000218504 630 ntBASIC15.07■□□□□ 0
Ubr1O70481 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ubr1O70481 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Ubr1O70481 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Ubr1O70481 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Ubr1O70481 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ubr1O70481 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ubr1O70481 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ubr1O70481 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC15.07■□□□□ 0
Ubr1O70481 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ubr1O70481 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ubr1O70481 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ubr1O70481 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Ubr1O70481 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ubr1O70481 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ubr1O70481 Snord23-201ENSMUST00000116828 109 ntBASIC15.06■□□□□ 0
Ubr1O70481 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ubr1O70481 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC15.06■□□□□ 0
Ubr1O70481 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ubr1O70481 Mrip-ps-201ENSMUST00000184613 940 ntBASIC15.06■□□□□ 0
Ubr1O70481 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC15.06■□□□□ 0
Ubr1O70481 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ubr1O70481 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ubr1O70481 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ubr1O70481 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Ubr1O70481 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ubr1O70481 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Ubr1O70481 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ubr1O70481 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Ubr1O70481 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ubr1O70481 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ubr1O70481 Gm5822-201ENSMUST00000161562 1378 ntBASIC15.06■□□□□ 0
Ubr1O70481 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC15.06■□□□□ 0
Ubr1O70481 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Ubr1O70481 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Ubr1O70481 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ubr1O70481 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC15.06■□□□□ 0
Ubr1O70481 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Ubr1O70481 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Ubr1O70481 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ubr1O70481 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC15.06■□□□□ 0
Ubr1O70481 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Ubr1O70481 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Ubr1O70481 Gm37651-201ENSMUST00000194679 1494 ntBASIC15.06■□□□□ 0
Ubr1O70481 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC15.06■□□□□ 0
Ubr1O70481 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.06■□□□□ 0
Ubr1O70481 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ubr1O70481 Gm8302-201ENSMUST00000119217 852 ntBASIC15.06■□□□□ 0
Ubr1O70481 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC15.06■□□□□ 0
Ubr1O70481 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC15.06■□□□□ 0
Ubr1O70481 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ubr1O70481 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC15.06■□□□□ 0
Ubr1O70481 AC153962.2-201ENSMUST00000219417 550 ntBASIC15.06■□□□□ 0
Ubr1O70481 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ubr1O70481 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Ubr1O70481 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms