Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 AC158355.1-201ENSMUST00000215895 1705 ntBASIC10.02□□□□□ -0.81
Cxcl13O55038 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Cxcl13O55038 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cxcl13O55038 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Cxcl13O55038 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cxcl13O55038 Ptprm-203ENSMUST00000224091 3773 ntBASIC10.01□□□□□ -0.81
Cxcl13O55038 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cxcl13O55038 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cxcl13O55038 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cxcl13O55038 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cxcl13O55038 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cxcl13O55038 Gm18983-201ENSMUST00000222884 2729 ntBASIC10.01□□□□□ -0.81
Cxcl13O55038 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Cxcl13O55038 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cxcl13O55038 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cxcl13O55038 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cxcl13O55038 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Cxcl13O55038 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC10.01□□□□□ -0.81
Cxcl13O55038 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC10.01□□□□□ -0.81
Cxcl13O55038 Gm11949-201ENSMUST00000117640 372 ntBASIC10.01□□□□□ -0.81
Cxcl13O55038 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cxcl13O55038 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC10.01□□□□□ -0.81
Cxcl13O55038 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC10.01□□□□□ -0.81
Cxcl13O55038 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC10.01□□□□□ -0.81
Cxcl13O55038 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC10.01□□□□□ -0.81
Cxcl13O55038 Gm4654-201ENSMUST00000183305 982 ntBASIC10.01□□□□□ -0.81
Cxcl13O55038 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC10.01□□□□□ -0.81
Cxcl13O55038 Ighv5-11-201ENSMUST00000193354 371 ntBASIC10.01□□□□□ -0.81
Cxcl13O55038 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Cxcl13O55038 Gm43852-201ENSMUST00000202098 917 ntBASIC10.01□□□□□ -0.81
Cxcl13O55038 Gm9463-201ENSMUST00000206707 601 ntBASIC10.01□□□□□ -0.81
Cxcl13O55038 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC10.01□□□□□ -0.81
Cxcl13O55038 CT485607.1-201ENSMUST00000216100 85 ntBASIC10.01□□□□□ -0.81
Cxcl13O55038 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC10.01□□□□□ -0.81
Cxcl13O55038 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cxcl13O55038 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC10.01□□□□□ -0.81
Cxcl13O55038 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cxcl13O55038 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cxcl13O55038 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cxcl13O55038 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Cxcl13O55038 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Cxcl13O55038 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cxcl13O55038 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cxcl13O55038 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Cxcl13O55038 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Cxcl13O55038 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cxcl13O55038 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cxcl13O55038 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cxcl13O55038 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Cxcl13O55038 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Cxcl13O55038 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cxcl13O55038 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC10.01□□□□□ -0.81
Cxcl13O55038 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC10□□□□□ -0.81
Cxcl13O55038 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Cxcl13O55038 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Cxcl13O55038 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Cxcl13O55038 Gm10305-201ENSMUST00000195331 2475 ntBASIC10□□□□□ -0.81
Cxcl13O55038 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC10□□□□□ -0.81
Cxcl13O55038 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Cxcl13O55038 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Cxcl13O55038 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Cxcl13O55038 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC10□□□□□ -0.81
Cxcl13O55038 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Cxcl13O55038 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Cxcl13O55038 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC10□□□□□ -0.81
Cxcl13O55038 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC10□□□□□ -0.81
Cxcl13O55038 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC10□□□□□ -0.81
Cxcl13O55038 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC10□□□□□ -0.81
Cxcl13O55038 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Cxcl13O55038 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC10□□□□□ -0.81
Cxcl13O55038 Ntrk2-204ENSMUST00000224259 3049 ntBASIC10□□□□□ -0.81
Cxcl13O55038 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Cxcl13O55038 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Cxcl13O55038 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Cxcl13O55038 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Cxcl13O55038 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Cxcl13O55038 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Cxcl13O55038 Gm13328-201ENSMUST00000120816 1020 ntBASIC10□□□□□ -0.81
Cxcl13O55038 Gm11836-201ENSMUST00000121022 441 ntBASIC10□□□□□ -0.81
Cxcl13O55038 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC10□□□□□ -0.81
Cxcl13O55038 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC10□□□□□ -0.81
Cxcl13O55038 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Cxcl13O55038 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC10□□□□□ -0.81
Cxcl13O55038 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC10□□□□□ -0.81
Cxcl13O55038 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC10□□□□□ -0.81
Cxcl13O55038 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC10□□□□□ -0.81
Cxcl13O55038 Gm44551-201ENSMUST00000208804 171 ntBASIC10□□□□□ -0.81
Cxcl13O55038 Gm2517-201ENSMUST00000215651 348 ntBASIC10□□□□□ -0.81
Cxcl13O55038 AC153505.1-201ENSMUST00000218819 1071 ntBASIC10□□□□□ -0.81
Cxcl13O55038 AC166344.1-201ENSMUST00000223745 674 ntBASIC10□□□□□ -0.81
Cxcl13O55038 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Cxcl13O55038 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Cxcl13O55038 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC10□□□□□ -0.81
Cxcl13O55038 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Cxcl13O55038 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Cxcl13O55038 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC10□□□□□ -0.81
Cxcl13O55038 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Cxcl13O55038 Gm27177-202ENSMUST00000183514 2703 ntBASIC10□□□□□ -0.81
Cxcl13O55038 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC10□□□□□ -0.81
Cxcl13O55038 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC10□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms