Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarce1O54941 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Smarce1O54941 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smarce1O54941 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smarce1O54941 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Smarce1O54941 Trav4d-2-201ENSMUST00000120914 335 ntBASIC14.04□□□□□ -0.16
Smarce1O54941 Gm15547-201ENSMUST00000122152 333 ntBASIC14.04□□□□□ -0.16
Smarce1O54941 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC14.04□□□□□ -0.16
Smarce1O54941 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Smarce1O54941 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC14.04□□□□□ -0.16
Smarce1O54941 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC14.04□□□□□ -0.16
Smarce1O54941 Gm8712-201ENSMUST00000221090 701 ntBASIC14.04□□□□□ -0.16
Smarce1O54941 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarce1O54941 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Smarce1O54941 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarce1O54941 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarce1O54941 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarce1O54941 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarce1O54941 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Smarce1O54941 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC14.04□□□□□ -0.16
Smarce1O54941 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Smarce1O54941 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smarce1O54941 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarce1O54941 Gm17230-201ENSMUST00000171194 3942 ntBASIC14.04□□□□□ -0.16
Smarce1O54941 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Smarce1O54941 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarce1O54941 Gm44086-201ENSMUST00000203251 2349 ntBASIC14.03□□□□□ -0.16
Smarce1O54941 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Smarce1O54941 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC14.03□□□□□ -0.16
Smarce1O54941 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarce1O54941 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarce1O54941 Gm13297-201ENSMUST00000120205 934 ntBASIC14.03□□□□□ -0.16
Smarce1O54941 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC14.03□□□□□ -0.16
Smarce1O54941 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC14.03□□□□□ -0.16
Smarce1O54941 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC14.03□□□□□ -0.16
Smarce1O54941 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC14.03□□□□□ -0.16
Smarce1O54941 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Smarce1O54941 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smarce1O54941 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC14.03□□□□□ -0.16
Smarce1O54941 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC14.03□□□□□ -0.16
Smarce1O54941 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC14.03□□□□□ -0.16
Smarce1O54941 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC14.03□□□□□ -0.16
Smarce1O54941 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC14.03□□□□□ -0.16
Smarce1O54941 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarce1O54941 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarce1O54941 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC14.03□□□□□ -0.16
Smarce1O54941 AC091458.1-201ENSMUST00000220902 1361 ntBASIC14.03□□□□□ -0.16
Smarce1O54941 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarce1O54941 Gm7964-201ENSMUST00000051522 1378 ntBASIC14.03□□□□□ -0.16
Smarce1O54941 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC14.03□□□□□ -0.16
Smarce1O54941 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarce1O54941 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarce1O54941 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smarce1O54941 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarce1O54941 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarce1O54941 AC122291.1-201ENSMUST00000228937 5748 ntBASIC14.03□□□□□ -0.16
Smarce1O54941 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Smarce1O54941 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Smarce1O54941 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarce1O54941 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarce1O54941 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarce1O54941 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarce1O54941 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Smarce1O54941 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarce1O54941 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarce1O54941 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smarce1O54941 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC14.03□□□□□ -0.16
Smarce1O54941 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Smarce1O54941 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarce1O54941 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Smarce1O54941 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smarce1O54941 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smarce1O54941 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smarce1O54941 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smarce1O54941 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smarce1O54941 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smarce1O54941 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smarce1O54941 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smarce1O54941 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Smarce1O54941 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC14.02□□□□□ -0.16
Smarce1O54941 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC14.02□□□□□ -0.16
Smarce1O54941 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Smarce1O54941 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smarce1O54941 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC14.02□□□□□ -0.16
Smarce1O54941 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC14.02□□□□□ -0.16
Smarce1O54941 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Smarce1O54941 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Smarce1O54941 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Smarce1O54941 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Smarce1O54941 Gm11222-201ENSMUST00000119005 738 ntBASIC14.02□□□□□ -0.17
Smarce1O54941 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Smarce1O54941 Gm11960-201ENSMUST00000122068 925 ntBASIC14.02□□□□□ -0.17
Smarce1O54941 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC14.02□□□□□ -0.17
Smarce1O54941 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarce1O54941 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC14.02□□□□□ -0.17
Smarce1O54941 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarce1O54941 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Smarce1O54941 Gm38314-201ENSMUST00000195709 625 ntBASIC14.02□□□□□ -0.17
Smarce1O54941 Gm8956-201ENSMUST00000203939 825 ntBASIC14.02□□□□□ -0.17
Smarce1O54941 Gm19187-201ENSMUST00000206781 892 ntBASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms