Protein–RNA interactions for Protein: O35449

Prrt1, Proline-rich transmembrane protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt1O35449 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC9.99□□□□□ -0.81
Prrt1O35449 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Prrt1O35449 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Prrt1O35449 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC9.99□□□□□ -0.81
Prrt1O35449 AC154671.1-201ENSMUST00000228617 1578 ntBASIC9.99□□□□□ -0.81
Prrt1O35449 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Prrt1O35449 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC9.99□□□□□ -0.81
Prrt1O35449 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Prrt1O35449 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Prrt1O35449 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC9.99□□□□□ -0.81
Prrt1O35449 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Prrt1O35449 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Prrt1O35449 Gm18986-201ENSMUST00000216029 1986 ntBASIC9.99□□□□□ -0.81
Prrt1O35449 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Prrt1O35449 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Prrt1O35449 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Prrt1O35449 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC9.99□□□□□ -0.81
Prrt1O35449 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC9.98□□□□□ -0.81
Prrt1O35449 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Prrt1O35449 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Prrt1O35449 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Prrt1O35449 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC9.98□□□□□ -0.81
Prrt1O35449 Gm38089-201ENSMUST00000193585 1514 ntBASIC9.98□□□□□ -0.81
Prrt1O35449 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Prrt1O35449 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Prrt1O35449 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Prrt1O35449 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Prrt1O35449 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Prrt1O35449 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Prrt1O35449 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Prrt1O35449 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Prrt1O35449 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC9.98□□□□□ -0.81
Prrt1O35449 Gm8155-201ENSMUST00000216363 1612 ntBASIC9.98□□□□□ -0.81
Prrt1O35449 Gm24934-201ENSMUST00000103764 111 ntBASIC9.98□□□□□ -0.81
Prrt1O35449 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC9.98□□□□□ -0.81
Prrt1O35449 Gm15610-201ENSMUST00000120584 195 ntBASIC9.98□□□□□ -0.81
Prrt1O35449 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Prrt1O35449 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC9.98□□□□□ -0.81
Prrt1O35449 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC9.98□□□□□ -0.81
Prrt1O35449 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC9.98□□□□□ -0.81
Prrt1O35449 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Prrt1O35449 Wdyhv1-203ENSMUST00000226889 394 ntBASIC9.98□□□□□ -0.81
Prrt1O35449 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Prrt1O35449 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Prrt1O35449 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC9.98□□□□□ -0.81
Prrt1O35449 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Prrt1O35449 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Prrt1O35449 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC9.98□□□□□ -0.81
Prrt1O35449 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC9.98□□□□□ -0.81
Prrt1O35449 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Prrt1O35449 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC9.98□□□□□ -0.81
Prrt1O35449 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Prrt1O35449 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Prrt1O35449 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Prrt1O35449 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Prrt1O35449 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Prrt1O35449 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Prrt1O35449 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Prrt1O35449 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Prrt1O35449 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC9.98□□□□□ -0.81
Prrt1O35449 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Prrt1O35449 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Prrt1O35449 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Prrt1O35449 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC9.98□□□□□ -0.81
Prrt1O35449 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Prrt1O35449 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Prrt1O35449 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Prrt1O35449 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Prrt1O35449 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Prrt1O35449 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Prrt1O35449 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Prrt1O35449 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Prrt1O35449 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
Prrt1O35449 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC9.97□□□□□ -0.81
Prrt1O35449 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Prrt1O35449 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Prrt1O35449 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Prrt1O35449 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Prrt1O35449 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Prrt1O35449 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Prrt1O35449 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Prrt1O35449 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Prrt1O35449 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Prrt1O35449 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Prrt1O35449 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Prrt1O35449 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Prrt1O35449 Gm11803-201ENSMUST00000119966 444 ntBASIC9.97□□□□□ -0.81
Prrt1O35449 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC9.97□□□□□ -0.81
Prrt1O35449 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Prrt1O35449 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Prrt1O35449 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Prrt1O35449 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Prrt1O35449 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC9.97□□□□□ -0.81
Prrt1O35449 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Prrt1O35449 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC9.97□□□□□ -0.81
Prrt1O35449 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Prrt1O35449 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC9.97□□□□□ -0.81
Prrt1O35449 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Prrt1O35449 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Prrt1O35449 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms