Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf11bO08712 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf11bO08712 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf11bO08712 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf11bO08712 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf11bO08712 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Tnfrsf11bO08712 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf11bO08712 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf11bO08712 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Tnfrsf11bO08712 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf11bO08712 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12□□□□□ -0.49
Tnfrsf11bO08712 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12□□□□□ -0.49
Tnfrsf11bO08712 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12□□□□□ -0.49
Tnfrsf11bO08712 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12□□□□□ -0.49
Tnfrsf11bO08712 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf11bO08712 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12□□□□□ -0.49
Tnfrsf11bO08712 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC12□□□□□ -0.49
Tnfrsf11bO08712 Gm8862-201ENSMUST00000198379 1346 ntBASIC12□□□□□ -0.49
Tnfrsf11bO08712 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf11bO08712 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf11bO08712 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Tnfrsf11bO08712 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf11bO08712 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf11bO08712 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf11bO08712 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf11bO08712 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf11bO08712 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf11bO08712 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf11bO08712 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf11bO08712 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf11bO08712 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf11bO08712 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf11bO08712 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf11bO08712 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf11bO08712 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC12□□□□□ -0.49
Tnfrsf11bO08712 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf11bO08712 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf11bO08712 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf11bO08712 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf11bO08712 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf11bO08712 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf11bO08712 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf11bO08712 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf11bO08712 Gm15004-201ENSMUST00000119192 630 ntBASIC11.99□□□□□ -0.49
Tnfrsf11bO08712 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf11bO08712 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf11bO08712 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC11.99□□□□□ -0.49
Tnfrsf11bO08712 Rprl1-202ENSMUST00000198476 238 ntBASIC11.99□□□□□ -0.49
Tnfrsf11bO08712 Gm45865-201ENSMUST00000211815 945 ntBASIC11.99□□□□□ -0.49
Tnfrsf11bO08712 AC122371.3-201ENSMUST00000223402 1061 ntBASIC11.99□□□□□ -0.49
Tnfrsf11bO08712 Cts7-204ENSMUST00000225321 1257 ntBASIC11.99□□□□□ -0.49
Tnfrsf11bO08712 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Tnfrsf11bO08712 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Tnfrsf11bO08712 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf11bO08712 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.99□□□□□ -0.49
Tnfrsf11bO08712 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Tnfrsf11bO08712 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf11bO08712 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.99□□□□□ -0.49
Tnfrsf11bO08712 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.99□□□□□ -0.49
Tnfrsf11bO08712 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.99□□□□□ -0.49
Tnfrsf11bO08712 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf11bO08712 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf11bO08712 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf11bO08712 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf11bO08712 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Tnfrsf11bO08712 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf11bO08712 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf11bO08712 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf11bO08712 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
Tnfrsf11bO08712 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf11bO08712 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Tnfrsf11bO08712 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfrsf11bO08712 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfrsf11bO08712 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfrsf11bO08712 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfrsf11bO08712 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfrsf11bO08712 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfrsf11bO08712 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Tnfrsf11bO08712 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfrsf11bO08712 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfrsf11bO08712 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfrsf11bO08712 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Tnfrsf11bO08712 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Tnfrsf11bO08712 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.98□□□□□ -0.49
Tnfrsf11bO08712 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.98□□□□□ -0.49
Tnfrsf11bO08712 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC11.98□□□□□ -0.49
Tnfrsf11bO08712 Gm14127-201ENSMUST00000117906 678 ntBASIC11.98□□□□□ -0.49
Tnfrsf11bO08712 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
Tnfrsf11bO08712 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfrsf11bO08712 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC11.98□□□□□ -0.49
Tnfrsf11bO08712 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfrsf11bO08712 Mir8109-201ENSMUST00000184375 117 ntBASIC11.98□□□□□ -0.49
Tnfrsf11bO08712 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC11.98□□□□□ -0.49
Tnfrsf11bO08712 Gm32999-201ENSMUST00000192693 562 ntBASIC11.98□□□□□ -0.49
Tnfrsf11bO08712 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC11.98□□□□□ -0.49
Tnfrsf11bO08712 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC11.98□□□□□ -0.49
Tnfrsf11bO08712 Gm43962-201ENSMUST00000203898 190 ntBASIC11.98□□□□□ -0.49
Tnfrsf11bO08712 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfrsf11bO08712 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC11.98□□□□□ -0.49
Tnfrsf11bO08712 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms