Protein–RNA interactions for Protein: O08583

Alyref, THO complex subunit 4, mousemouse

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AlyrefO08583 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
AlyrefO08583 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
AlyrefO08583 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
AlyrefO08583 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
AlyrefO08583 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
AlyrefO08583 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
AlyrefO08583 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.13□□□□□ -0.47
AlyrefO08583 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.12□□□□□ -0.47
AlyrefO08583 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
AlyrefO08583 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
AlyrefO08583 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
AlyrefO08583 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
AlyrefO08583 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
AlyrefO08583 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
AlyrefO08583 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.12□□□□□ -0.47
AlyrefO08583 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.12□□□□□ -0.47
AlyrefO08583 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
AlyrefO08583 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
AlyrefO08583 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
AlyrefO08583 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
AlyrefO08583 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
AlyrefO08583 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
AlyrefO08583 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
AlyrefO08583 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
AlyrefO08583 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.12□□□□□ -0.47
AlyrefO08583 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
AlyrefO08583 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
AlyrefO08583 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.12□□□□□ -0.47
AlyrefO08583 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC12.12□□□□□ -0.47
AlyrefO08583 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
AlyrefO08583 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC12.12□□□□□ -0.47
AlyrefO08583 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC12.12□□□□□ -0.47
AlyrefO08583 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
AlyrefO08583 AC130477.1-201ENSMUST00000226982 420 ntBASIC12.12□□□□□ -0.47
AlyrefO08583 AC142266.1-201ENSMUST00000228107 415 ntBASIC12.12□□□□□ -0.47
AlyrefO08583 Rpp30-201ENSMUST00000025714 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
AlyrefO08583 Mir326-201ENSMUST00000083637 95 ntBASIC12.12□□□□□ -0.47
AlyrefO08583 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
AlyrefO08583 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
AlyrefO08583 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
AlyrefO08583 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
AlyrefO08583 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
AlyrefO08583 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
AlyrefO08583 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
AlyrefO08583 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
AlyrefO08583 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
AlyrefO08583 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
AlyrefO08583 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
AlyrefO08583 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
AlyrefO08583 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.11□□□□□ -0.47
AlyrefO08583 Gm18210-201ENSMUST00000209001 1524 ntBASIC12.11□□□□□ -0.47
AlyrefO08583 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
AlyrefO08583 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
AlyrefO08583 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
AlyrefO08583 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
AlyrefO08583 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
AlyrefO08583 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
AlyrefO08583 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
AlyrefO08583 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
AlyrefO08583 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
AlyrefO08583 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.11□□□□□ -0.47
AlyrefO08583 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
AlyrefO08583 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC12.11□□□□□ -0.47
AlyrefO08583 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
AlyrefO08583 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
AlyrefO08583 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC12.11□□□□□ -0.47
AlyrefO08583 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC12.11□□□□□ -0.47
AlyrefO08583 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
AlyrefO08583 Gm16459-201ENSMUST00000121443 686 ntBASIC12.11□□□□□ -0.47
AlyrefO08583 Gm14616-201ENSMUST00000131690 314 ntTSL 3 BASIC12.11□□□□□ -0.47
AlyrefO08583 Gm43037-201ENSMUST00000196808 250 ntBASIC12.11□□□□□ -0.47
AlyrefO08583 Gm43777-201ENSMUST00000197269 376 ntTSL 3 BASIC12.11□□□□□ -0.47
AlyrefO08583 Gm45060-201ENSMUST00000203293 593 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
AlyrefO08583 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC12.11□□□□□ -0.47
AlyrefO08583 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC12.11□□□□□ -0.47
AlyrefO08583 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
AlyrefO08583 AU017674-201ENSMUST00000222864 720 ntTSL 3 BASIC12.11□□□□□ -0.47
AlyrefO08583 AC114573.1-201ENSMUST00000224120 1210 ntBASIC12.11□□□□□ -0.47
AlyrefO08583 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
AlyrefO08583 Rnf212-201ENSMUST00000068946 288 ntTSL 5 BASIC12.11□□□□□ -0.47
AlyrefO08583 Gm10580-201ENSMUST00000097985 396 ntBASIC12.11□□□□□ -0.47
AlyrefO08583 Gm10581-201ENSMUST00000097986 231 ntBASIC12.11□□□□□ -0.47
AlyrefO08583 Gm10582-201ENSMUST00000097987 396 ntBASIC12.11□□□□□ -0.47
AlyrefO08583 Gm10583-201ENSMUST00000097988 396 ntBASIC12.11□□□□□ -0.47
AlyrefO08583 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
AlyrefO08583 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
AlyrefO08583 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
AlyrefO08583 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
AlyrefO08583 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.11□□□□□ -0.47
AlyrefO08583 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
AlyrefO08583 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
AlyrefO08583 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
AlyrefO08583 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
AlyrefO08583 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
AlyrefO08583 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
AlyrefO08583 Tipin-205ENSMUST00000216594 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
AlyrefO08583 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
AlyrefO08583 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
AlyrefO08583 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.11□□□□□ -0.47
AlyrefO08583 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms