Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Atf6F6VAN0 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.18□□□□□ -0.46
Atf6F6VAN0 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Atf6F6VAN0 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12.18□□□□□ -0.46
Atf6F6VAN0 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12.18□□□□□ -0.46
Atf6F6VAN0 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.18□□□□□ -0.46
Atf6F6VAN0 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.18□□□□□ -0.46
Atf6F6VAN0 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Atf6F6VAN0 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atf6F6VAN0 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atf6F6VAN0 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Atf6F6VAN0 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Atf6F6VAN0 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Atf6F6VAN0 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atf6F6VAN0 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC12.18□□□□□ -0.46
Atf6F6VAN0 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Atf6F6VAN0 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atf6F6VAN0 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.18□□□□□ -0.46
Atf6F6VAN0 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atf6F6VAN0 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC12.18□□□□□ -0.46
Atf6F6VAN0 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.18□□□□□ -0.46
Atf6F6VAN0 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atf6F6VAN0 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Atf6F6VAN0 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atf6F6VAN0 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atf6F6VAN0 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.18□□□□□ -0.46
Atf6F6VAN0 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.18□□□□□ -0.46
Atf6F6VAN0 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Atf6F6VAN0 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Atf6F6VAN0 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Atf6F6VAN0 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atf6F6VAN0 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.17□□□□□ -0.46
Atf6F6VAN0 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Atf6F6VAN0 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.17□□□□□ -0.46
Atf6F6VAN0 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atf6F6VAN0 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atf6F6VAN0 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atf6F6VAN0 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC12.17□□□□□ -0.46
Atf6F6VAN0 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Atf6F6VAN0 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atf6F6VAN0 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Atf6F6VAN0 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Atf6F6VAN0 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atf6F6VAN0 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atf6F6VAN0 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Atf6F6VAN0 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atf6F6VAN0 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atf6F6VAN0 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.17□□□□□ -0.46
Atf6F6VAN0 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.17□□□□□ -0.46
Atf6F6VAN0 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.17□□□□□ -0.46
Atf6F6VAN0 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.17□□□□□ -0.46
Atf6F6VAN0 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atf6F6VAN0 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atf6F6VAN0 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atf6F6VAN0 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Atf6F6VAN0 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.17□□□□□ -0.46
Atf6F6VAN0 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC12.17□□□□□ -0.46
Atf6F6VAN0 Gm6082-201ENSMUST00000215204 454 ntBASIC12.17□□□□□ -0.46
Atf6F6VAN0 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.17□□□□□ -0.46
Atf6F6VAN0 AC121960.1-201ENSMUST00000227982 564 ntBASIC12.17□□□□□ -0.46
Atf6F6VAN0 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atf6F6VAN0 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atf6F6VAN0 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atf6F6VAN0 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atf6F6VAN0 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Atf6F6VAN0 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atf6F6VAN0 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atf6F6VAN0 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atf6F6VAN0 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atf6F6VAN0 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.17□□□□□ -0.46
Atf6F6VAN0 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Atf6F6VAN0 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atf6F6VAN0 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atf6F6VAN0 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atf6F6VAN0 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Atf6F6VAN0 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atf6F6VAN0 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Atf6F6VAN0 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atf6F6VAN0 Gm8146-201ENSMUST00000192106 1847 ntBASIC12.16□□□□□ -0.46
Atf6F6VAN0 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Atf6F6VAN0 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atf6F6VAN0 Gm18986-201ENSMUST00000216029 1986 ntBASIC12.16□□□□□ -0.46
Atf6F6VAN0 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Atf6F6VAN0 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.16□□□□□ -0.46
Atf6F6VAN0 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.16□□□□□ -0.46
Atf6F6VAN0 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atf6F6VAN0 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Atf6F6VAN0 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atf6F6VAN0 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Atf6F6VAN0 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Atf6F6VAN0 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Atf6F6VAN0 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC12.16□□□□□ -0.46
Atf6F6VAN0 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Atf6F6VAN0 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Atf6F6VAN0 Gm11511-201ENSMUST00000118146 540 ntBASIC12.16□□□□□ -0.46
Atf6F6VAN0 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atf6F6VAN0 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Atf6F6VAN0 Gm25890-201ENSMUST00000177643 165 ntBASIC12.16□□□□□ -0.46
Atf6F6VAN0 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.16□□□□□ -0.46
Atf6F6VAN0 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms