Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Gm28043E0CXC2 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC11.91□□□□□ -0.5
Gm28043E0CXC2 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm28043E0CXC2 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Gm28043E0CXC2 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Gm28043E0CXC2 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Gm28043E0CXC2 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Gm28043E0CXC2 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.9□□□□□ -0.5
Gm28043E0CXC2 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.9□□□□□ -0.5
Gm28043E0CXC2 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Gm28043E0CXC2 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Gm28043E0CXC2 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.9□□□□□ -0.5
Gm28043E0CXC2 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Gm28043E0CXC2 Rgr-203ENSMUST00000225070 4704 ntBASIC11.9□□□□□ -0.5
Gm28043E0CXC2 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Gm28043E0CXC2 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Gm28043E0CXC2 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Gm28043E0CXC2 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.9□□□□□ -0.5
Gm28043E0CXC2 Gm12241-201ENSMUST00000118330 726 ntBASIC11.9□□□□□ -0.5
Gm28043E0CXC2 Gm11222-201ENSMUST00000119005 738 ntBASIC11.9□□□□□ -0.5
Gm28043E0CXC2 Gm13570-201ENSMUST00000140763 309 ntBASIC11.9□□□□□ -0.5
Gm28043E0CXC2 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC11.9□□□□□ -0.5
Gm28043E0CXC2 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.9□□□□□ -0.5
Gm28043E0CXC2 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Gm28043E0CXC2 Gm44974-201ENSMUST00000206387 1279 ntBASIC11.9□□□□□ -0.5
Gm28043E0CXC2 Gm10110-202ENSMUST00000228705 3220 ntBASIC11.9□□□□□ -0.5
Gm28043E0CXC2 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Gm28043E0CXC2 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Gm28043E0CXC2 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Gm28043E0CXC2 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
Gm28043E0CXC2 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Gm28043E0CXC2 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC11.9□□□□□ -0.5
Gm28043E0CXC2 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Gm28043E0CXC2 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Gm28043E0CXC2 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.9□□□□□ -0.5
Gm28043E0CXC2 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC11.9□□□□□ -0.5
Gm28043E0CXC2 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Gm28043E0CXC2 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Gm28043E0CXC2 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Gm28043E0CXC2 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Gm28043E0CXC2 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Gm28043E0CXC2 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Gm28043E0CXC2 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.9□□□□□ -0.51
Gm28043E0CXC2 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
Gm28043E0CXC2 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
Gm28043E0CXC2 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Gm28043E0CXC2 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.89□□□□□ -0.51
Gm28043E0CXC2 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Gm28043E0CXC2 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Gm28043E0CXC2 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Gm28043E0CXC2 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Gm28043E0CXC2 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.89□□□□□ -0.51
Gm28043E0CXC2 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Gm28043E0CXC2 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Gm28043E0CXC2 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Gm28043E0CXC2 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Gm28043E0CXC2 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.89□□□□□ -0.51
Gm28043E0CXC2 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Gm28043E0CXC2 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Gm28043E0CXC2 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11.89□□□□□ -0.51
Gm28043E0CXC2 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC11.89□□□□□ -0.51
Gm28043E0CXC2 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Gm28043E0CXC2 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Gm28043E0CXC2 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Gm28043E0CXC2 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Gm28043E0CXC2 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Gm28043E0CXC2 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Gm28043E0CXC2 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Gm28043E0CXC2 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Gm28043E0CXC2 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC11.89□□□□□ -0.51
Gm28043E0CXC2 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC11.89□□□□□ -0.51
Gm28043E0CXC2 Gm25043-201ENSMUST00000158604 212 ntBASIC11.89□□□□□ -0.51
Gm28043E0CXC2 Mir1938-201ENSMUST00000158746 100 ntBASIC11.89□□□□□ -0.51
Gm28043E0CXC2 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.89□□□□□ -0.51
Gm28043E0CXC2 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC11.89□□□□□ -0.51
Gm28043E0CXC2 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC11.89□□□□□ -0.51
Gm28043E0CXC2 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC11.89□□□□□ -0.51
Gm28043E0CXC2 Gm44958-201ENSMUST00000203734 736 ntBASIC11.89□□□□□ -0.51
Gm28043E0CXC2 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC11.89□□□□□ -0.51
Gm28043E0CXC2 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Gm28043E0CXC2 AC132384.14-201ENSMUST00000219346 1147 ntBASIC11.89□□□□□ -0.51
Gm28043E0CXC2 Gm9368-201ENSMUST00000219348 831 ntBASIC11.89□□□□□ -0.51
Gm28043E0CXC2 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Gm28043E0CXC2 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC11.89□□□□□ -0.51
Gm28043E0CXC2 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Gm28043E0CXC2 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Gm28043E0CXC2 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Gm28043E0CXC2 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC11.89□□□□□ -0.51
Gm28043E0CXC2 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Gm28043E0CXC2 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Gm28043E0CXC2 Gm42853-201ENSMUST00000201273 1387 ntBASIC11.89□□□□□ -0.51
Gm28043E0CXC2 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Gm28043E0CXC2 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Gm28043E0CXC2 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Gm28043E0CXC2 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Gm28043E0CXC2 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Gm28043E0CXC2 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Gm28043E0CXC2 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Gm28043E0CXC2 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Gm28043E0CXC2 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms