Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim30cD3YVI9 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim30cD3YVI9 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC13.01□□□□□ -0.33
Trim30cD3YVI9 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim30cD3YVI9 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC13.01□□□□□ -0.33
Trim30cD3YVI9 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim30cD3YVI9 Gm9257-201ENSMUST00000221254 232 ntBASIC13.01□□□□□ -0.33
Trim30cD3YVI9 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim30cD3YVI9 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim30cD3YVI9 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim30cD3YVI9 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim30cD3YVI9 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC13.01□□□□□ -0.33
Trim30cD3YVI9 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim30cD3YVI9 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Trim30cD3YVI9 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim30cD3YVI9 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim30cD3YVI9 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC13.01□□□□□ -0.33
Trim30cD3YVI9 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim30cD3YVI9 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim30cD3YVI9 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim30cD3YVI9 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC13.01□□□□□ -0.33
Trim30cD3YVI9 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim30cD3YVI9 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC13.01□□□□□ -0.33
Trim30cD3YVI9 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim30cD3YVI9 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim30cD3YVI9 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trim30cD3YVI9 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim30cD3YVI9 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trim30cD3YVI9 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trim30cD3YVI9 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Trim30cD3YVI9 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim30cD3YVI9 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trim30cD3YVI9 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trim30cD3YVI9 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim30cD3YVI9 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim30cD3YVI9 Gm2128-201ENSMUST00000108009 2560 ntBASIC13□□□□□ -0.33
Trim30cD3YVI9 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trim30cD3YVI9 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim30cD3YVI9 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim30cD3YVI9 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trim30cD3YVI9 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trim30cD3YVI9 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trim30cD3YVI9 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim30cD3YVI9 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim30cD3YVI9 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim30cD3YVI9 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC13□□□□□ -0.33
Trim30cD3YVI9 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC13□□□□□ -0.33
Trim30cD3YVI9 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim30cD3YVI9 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim30cD3YVI9 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim30cD3YVI9 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC13□□□□□ -0.33
Trim30cD3YVI9 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim30cD3YVI9 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC13□□□□□ -0.33
Trim30cD3YVI9 Ighv1-62-201ENSMUST00000193406 350 ntBASIC13□□□□□ -0.33
Trim30cD3YVI9 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim30cD3YVI9 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC13□□□□□ -0.33
Trim30cD3YVI9 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trim30cD3YVI9 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim30cD3YVI9 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trim30cD3YVI9 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trim30cD3YVI9 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim30cD3YVI9 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trim30cD3YVI9 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim30cD3YVI9 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim30cD3YVI9 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim30cD3YVI9 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim30cD3YVI9 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim30cD3YVI9 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Trim30cD3YVI9 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim30cD3YVI9 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trim30cD3YVI9 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim30cD3YVI9 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trim30cD3YVI9 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim30cD3YVI9 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim30cD3YVI9 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC12.99□□□□□ -0.33
Trim30cD3YVI9 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim30cD3YVI9 Gm9544-201ENSMUST00000223349 2482 ntBASIC12.99□□□□□ -0.33
Trim30cD3YVI9 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim30cD3YVI9 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim30cD3YVI9 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim30cD3YVI9 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trim30cD3YVI9 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.99□□□□□ -0.33
Trim30cD3YVI9 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trim30cD3YVI9 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim30cD3YVI9 Gm23270-201ENSMUST00000104055 131 ntBASIC12.99□□□□□ -0.33
Trim30cD3YVI9 Gm14999-201ENSMUST00000121039 624 ntBASIC12.99□□□□□ -0.33
Trim30cD3YVI9 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim30cD3YVI9 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim30cD3YVI9 Gm26083-201ENSMUST00000157904 193 ntBASIC12.99□□□□□ -0.33
Trim30cD3YVI9 Gm27243-201ENSMUST00000183964 521 ntBASIC12.99□□□□□ -0.33
Trim30cD3YVI9 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.99□□□□□ -0.33
Trim30cD3YVI9 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim30cD3YVI9 Gm39404-201ENSMUST00000216350 313 ntBASIC12.99□□□□□ -0.33
Trim30cD3YVI9 AC114573.1-201ENSMUST00000224120 1210 ntBASIC12.99□□□□□ -0.33
Trim30cD3YVI9 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.99□□□□□ -0.33
Trim30cD3YVI9 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.99□□□□□ -0.33
Trim30cD3YVI9 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim30cD3YVI9 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim30cD3YVI9 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim30cD3YVI9 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 186.2 ms