Protein–RNA interactions for Protein: B2RUQ2

Usf3, Gene model 608, (NCBI), mousemouse

Predictions only

Length 2,221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3B2RUQ2 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC9.92□□□□□ -0.82
Usf3B2RUQ2 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC9.92□□□□□ -0.82
Usf3B2RUQ2 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Usf3B2RUQ2 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Usf3B2RUQ2 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Usf3B2RUQ2 Mypopos-202ENSMUST00000205975 2321 ntBASIC9.92□□□□□ -0.82
Usf3B2RUQ2 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Usf3B2RUQ2 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC9.92□□□□□ -0.82
Usf3B2RUQ2 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Usf3B2RUQ2 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Usf3B2RUQ2 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Usf3B2RUQ2 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC9.92□□□□□ -0.82
Usf3B2RUQ2 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Usf3B2RUQ2 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC9.92□□□□□ -0.82
Usf3B2RUQ2 AC123619.2-202ENSMUST00000225097 1568 ntBASIC9.92□□□□□ -0.82
Usf3B2RUQ2 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Usf3B2RUQ2 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Usf3B2RUQ2 Rubie-203ENSMUST00000227803 2430 ntBASIC9.92□□□□□ -0.82
Usf3B2RUQ2 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Usf3B2RUQ2 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Usf3B2RUQ2 Gm18626-201ENSMUST00000221512 1409 ntBASIC9.92□□□□□ -0.82
Usf3B2RUQ2 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Usf3B2RUQ2 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
Usf3B2RUQ2 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC9.92□□□□□ -0.82
Usf3B2RUQ2 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC9.92□□□□□ -0.82
Usf3B2RUQ2 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Usf3B2RUQ2 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Usf3B2RUQ2 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Usf3B2RUQ2 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC9.92□□□□□ -0.82
Usf3B2RUQ2 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC9.92□□□□□ -0.82
Usf3B2RUQ2 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Usf3B2RUQ2 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Usf3B2RUQ2 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Usf3B2RUQ2 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Usf3B2RUQ2 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Usf3B2RUQ2 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Usf3B2RUQ2 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC9.92□□□□□ -0.82
Usf3B2RUQ2 Gm6039-201ENSMUST00000121667 1250 ntBASIC9.92□□□□□ -0.82
Usf3B2RUQ2 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC9.92□□□□□ -0.82
Usf3B2RUQ2 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC9.92□□□□□ -0.82
Usf3B2RUQ2 H2-Q3-201ENSMUST00000172583 608 ntBASIC9.92□□□□□ -0.82
Usf3B2RUQ2 Gm6771-201ENSMUST00000182716 1001 ntBASIC9.92□□□□□ -0.82
Usf3B2RUQ2 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC9.92□□□□□ -0.82
Usf3B2RUQ2 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Usf3B2RUQ2 Gm18304-201ENSMUST00000189162 546 ntBASIC9.92□□□□□ -0.82
Usf3B2RUQ2 Gm44958-201ENSMUST00000203734 736 ntBASIC9.92□□□□□ -0.82
Usf3B2RUQ2 Gm19994-201ENSMUST00000217086 586 ntBASIC9.92□□□□□ -0.82
Usf3B2RUQ2 Gm5369-201ENSMUST00000217499 588 ntBASIC9.92□□□□□ -0.82
Usf3B2RUQ2 AC154176.1-201ENSMUST00000225897 220 ntBASIC9.92□□□□□ -0.82
Usf3B2RUQ2 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC9.92□□□□□ -0.82
Usf3B2RUQ2 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Usf3B2RUQ2 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Usf3B2RUQ2 AC154639.1-201ENSMUST00000224393 2849 ntBASIC9.92□□□□□ -0.82
Usf3B2RUQ2 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Usf3B2RUQ2 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Usf3B2RUQ2 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
Usf3B2RUQ2 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Usf3B2RUQ2 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Usf3B2RUQ2 CT025678.1-201ENSMUST00000214795 2972 ntBASIC9.92□□□□□ -0.82
Usf3B2RUQ2 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Usf3B2RUQ2 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Usf3B2RUQ2 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Usf3B2RUQ2 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Usf3B2RUQ2 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Usf3B2RUQ2 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC9.92□□□□□ -0.82
Usf3B2RUQ2 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Usf3B2RUQ2 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Usf3B2RUQ2 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Usf3B2RUQ2 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Usf3B2RUQ2 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC9.91□□□□□ -0.82
Usf3B2RUQ2 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Usf3B2RUQ2 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Usf3B2RUQ2 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Usf3B2RUQ2 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC9.91□□□□□ -0.82
Usf3B2RUQ2 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC9.91□□□□□ -0.82
Usf3B2RUQ2 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Usf3B2RUQ2 Gm14644-201ENSMUST00000116671 647 ntBASIC9.91□□□□□ -0.82
Usf3B2RUQ2 Gm12816-201ENSMUST00000118069 1212 ntBASIC9.91□□□□□ -0.82
Usf3B2RUQ2 Gm13045-201ENSMUST00000119019 712 ntBASIC9.91□□□□□ -0.82
Usf3B2RUQ2 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Usf3B2RUQ2 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC9.91□□□□□ -0.82
Usf3B2RUQ2 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC9.91□□□□□ -0.82
Usf3B2RUQ2 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC9.91□□□□□ -0.82
Usf3B2RUQ2 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC9.91□□□□□ -0.82
Usf3B2RUQ2 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Usf3B2RUQ2 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Usf3B2RUQ2 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Usf3B2RUQ2 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Usf3B2RUQ2 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Usf3B2RUQ2 Gm5879-201ENSMUST00000089501 1209 ntBASIC9.91□□□□□ -0.82
Usf3B2RUQ2 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Usf3B2RUQ2 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Usf3B2RUQ2 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Usf3B2RUQ2 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC9.91□□□□□ -0.82
Usf3B2RUQ2 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Usf3B2RUQ2 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Usf3B2RUQ2 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Usf3B2RUQ2 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Usf3B2RUQ2 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Usf3B2RUQ2 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms