Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chd3B1AR17 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Chd3B1AR17 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC11.61□□□□□ -0.55
Chd3B1AR17 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chd3B1AR17 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Chd3B1AR17 Gm44999-201ENSMUST00000207456 1493 ntBASIC11.61□□□□□ -0.55
Chd3B1AR17 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Chd3B1AR17 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chd3B1AR17 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Chd3B1AR17 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Chd3B1AR17 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Chd3B1AR17 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chd3B1AR17 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chd3B1AR17 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chd3B1AR17 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chd3B1AR17 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC11.6□□□□□ -0.55
Chd3B1AR17 Gm14460-201ENSMUST00000121511 639 ntBASIC11.6□□□□□ -0.55
Chd3B1AR17 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC11.6□□□□□ -0.55
Chd3B1AR17 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chd3B1AR17 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.6□□□□□ -0.55
Chd3B1AR17 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chd3B1AR17 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC11.6□□□□□ -0.55
Chd3B1AR17 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
Chd3B1AR17 Gm18367-201ENSMUST00000176139 600 ntBASIC11.6□□□□□ -0.55
Chd3B1AR17 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Chd3B1AR17 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.6□□□□□ -0.55
Chd3B1AR17 Gm9211-201ENSMUST00000182882 975 ntBASIC11.6□□□□□ -0.55
Chd3B1AR17 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC11.6□□□□□ -0.55
Chd3B1AR17 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC11.6□□□□□ -0.55
Chd3B1AR17 Gm43520-201ENSMUST00000197996 164 ntBASIC11.6□□□□□ -0.55
Chd3B1AR17 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chd3B1AR17 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Chd3B1AR17 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Chd3B1AR17 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chd3B1AR17 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.6□□□□□ -0.55
Chd3B1AR17 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chd3B1AR17 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Chd3B1AR17 Gm44190-201ENSMUST00000205083 1401 ntBASIC11.6□□□□□ -0.55
Chd3B1AR17 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chd3B1AR17 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC11.6□□□□□ -0.55
Chd3B1AR17 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chd3B1AR17 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chd3B1AR17 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chd3B1AR17 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chd3B1AR17 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chd3B1AR17 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Chd3B1AR17 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Chd3B1AR17 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Chd3B1AR17 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chd3B1AR17 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chd3B1AR17 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Chd3B1AR17 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chd3B1AR17 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Chd3B1AR17 Gm11956-201ENSMUST00000119525 512 ntBASIC11.59□□□□□ -0.55
Chd3B1AR17 Gm13937-201ENSMUST00000121000 988 ntBASIC11.59□□□□□ -0.55
Chd3B1AR17 Gm11960-201ENSMUST00000122068 925 ntBASIC11.59□□□□□ -0.55
Chd3B1AR17 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC11.59□□□□□ -0.55
Chd3B1AR17 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Chd3B1AR17 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC11.59□□□□□ -0.55
Chd3B1AR17 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Chd3B1AR17 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Chd3B1AR17 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chd3B1AR17 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Chd3B1AR17 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Chd3B1AR17 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Chd3B1AR17 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Chd3B1AR17 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC11.59□□□□□ -0.55
Chd3B1AR17 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Chd3B1AR17 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chd3B1AR17 AC113082.1-201ENSMUST00000217324 327 ntBASIC11.59□□□□□ -0.55
Chd3B1AR17 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.59□□□□□ -0.55
Chd3B1AR17 Gm6722-201ENSMUST00000221586 390 ntBASIC11.59□□□□□ -0.55
Chd3B1AR17 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chd3B1AR17 CT009713.8-202ENSMUST00000224732 385 ntBASIC11.59□□□□□ -0.55
Chd3B1AR17 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chd3B1AR17 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chd3B1AR17 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC11.59□□□□□ -0.55
Chd3B1AR17 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Chd3B1AR17 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC11.59□□□□□ -0.55
Chd3B1AR17 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chd3B1AR17 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Chd3B1AR17 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chd3B1AR17 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Chd3B1AR17 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chd3B1AR17 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chd3B1AR17 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Chd3B1AR17 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Chd3B1AR17 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC11.59□□□□□ -0.55
Chd3B1AR17 Gm7666-201ENSMUST00000146631 819 ntBASIC11.59□□□□□ -0.55
Chd3B1AR17 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Chd3B1AR17 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chd3B1AR17 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11.59□□□□□ -0.55
Chd3B1AR17 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
Chd3B1AR17 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC11.59□□□□□ -0.55
Chd3B1AR17 AC153505.1-201ENSMUST00000218819 1071 ntBASIC11.59□□□□□ -0.55
Chd3B1AR17 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chd3B1AR17 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chd3B1AR17 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chd3B1AR17 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Chd3B1AR17 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms