Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav5-4A0A075B652 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav5-4A0A075B652 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC9.96□□□□□ -0.81
Trav5-4A0A075B652 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Trav5-4A0A075B652 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Trav5-4A0A075B652 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC9.96□□□□□ -0.81
Trav5-4A0A075B652 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav5-4A0A075B652 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav5-4A0A075B652 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC9.96□□□□□ -0.81
Trav5-4A0A075B652 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav5-4A0A075B652 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav5-4A0A075B652 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav5-4A0A075B652 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav5-4A0A075B652 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC9.96□□□□□ -0.81
Trav5-4A0A075B652 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Trav5-4A0A075B652 Gm12957-201ENSMUST00000117835 377 ntBASIC9.96□□□□□ -0.82
Trav5-4A0A075B652 Gm11793-201ENSMUST00000120433 981 ntBASIC9.96□□□□□ -0.82
Trav5-4A0A075B652 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Trav5-4A0A075B652 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC9.96□□□□□ -0.82
Trav5-4A0A075B652 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Trav5-4A0A075B652 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC9.96□□□□□ -0.82
Trav5-4A0A075B652 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC9.96□□□□□ -0.82
Trav5-4A0A075B652 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Trav5-4A0A075B652 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav5-4A0A075B652 Gm5950-201ENSMUST00000213337 772 ntBASIC9.96□□□□□ -0.82
Trav5-4A0A075B652 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav5-4A0A075B652 Morn2-202ENSMUST00000227729 656 ntBASIC9.96□□□□□ -0.82
Trav5-4A0A075B652 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Trav5-4A0A075B652 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav5-4A0A075B652 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav5-4A0A075B652 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Trav5-4A0A075B652 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Trav5-4A0A075B652 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC9.96□□□□□ -0.82
Trav5-4A0A075B652 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav5-4A0A075B652 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav5-4A0A075B652 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC9.96□□□□□ -0.82
Trav5-4A0A075B652 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Trav5-4A0A075B652 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Trav5-4A0A075B652 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Trav5-4A0A075B652 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav5-4A0A075B652 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC9.95□□□□□ -0.82
Trav5-4A0A075B652 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav5-4A0A075B652 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav5-4A0A075B652 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
Trav5-4A0A075B652 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Trav5-4A0A075B652 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav5-4A0A075B652 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav5-4A0A075B652 Gm10829-201ENSMUST00000202084 2988 ntBASIC9.95□□□□□ -0.82
Trav5-4A0A075B652 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav5-4A0A075B652 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav5-4A0A075B652 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav5-4A0A075B652 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav5-4A0A075B652 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav5-4A0A075B652 Gm11531-201ENSMUST00000117614 555 ntBASIC9.95□□□□□ -0.82
Trav5-4A0A075B652 Gm14832-201ENSMUST00000121289 322 ntBASIC9.95□□□□□ -0.82
Trav5-4A0A075B652 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav5-4A0A075B652 Rprl1-201ENSMUST00000158050 327 ntBASIC9.95□□□□□ -0.82
Trav5-4A0A075B652 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav5-4A0A075B652 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC9.95□□□□□ -0.82
Trav5-4A0A075B652 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC9.95□□□□□ -0.82
Trav5-4A0A075B652 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC9.95□□□□□ -0.82
Trav5-4A0A075B652 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC9.95□□□□□ -0.82
Trav5-4A0A075B652 Gm43118-201ENSMUST00000199149 775 ntBASIC9.95□□□□□ -0.82
Trav5-4A0A075B652 Gm18711-201ENSMUST00000199341 750 ntBASIC9.95□□□□□ -0.82
Trav5-4A0A075B652 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC9.95□□□□□ -0.82
Trav5-4A0A075B652 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC9.95□□□□□ -0.82
Trav5-4A0A075B652 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC9.95□□□□□ -0.82
Trav5-4A0A075B652 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav5-4A0A075B652 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav5-4A0A075B652 Gm9996-201ENSMUST00000070359 913 ntBASIC9.95□□□□□ -0.82
Trav5-4A0A075B652 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav5-4A0A075B652 AC131068.2-201ENSMUST00000226175 1453 ntBASIC9.95□□□□□ -0.82
Trav5-4A0A075B652 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC9.95□□□□□ -0.82
Trav5-4A0A075B652 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav5-4A0A075B652 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav5-4A0A075B652 AC167669.2-201ENSMUST00000224417 1620 ntBASIC9.95□□□□□ -0.82
Trav5-4A0A075B652 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC9.95□□□□□ -0.82
Trav5-4A0A075B652 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav5-4A0A075B652 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav5-4A0A075B652 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav5-4A0A075B652 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav5-4A0A075B652 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav5-4A0A075B652 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav5-4A0A075B652 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav5-4A0A075B652 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav5-4A0A075B652 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav5-4A0A075B652 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav5-4A0A075B652 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Trav5-4A0A075B652 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Trav5-4A0A075B652 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav5-4A0A075B652 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC9.95□□□□□ -0.82
Trav5-4A0A075B652 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav5-4A0A075B652 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav5-4A0A075B652 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Trav5-4A0A075B652 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Trav5-4A0A075B652 Arhgef3-204ENSMUST00000225949 3198 ntBASIC9.94□□□□□ -0.82
Trav5-4A0A075B652 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav5-4A0A075B652 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav5-4A0A075B652 Olfr1415-202ENSMUST00000204009 2815 ntAPPRIS P1 TSL 3 BASIC9.94□□□□□ -0.82
Trav5-4A0A075B652 BC043934-202ENSMUST00000185694 2356 ntBASIC9.94□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms