Protein–RNA interactions for Protein: Q9JM99

Prg4, Proteoglycan 4, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prg4Q9JM99 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Prg4Q9JM99 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Prg4Q9JM99 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Prg4Q9JM99 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Prg4Q9JM99 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Prg4Q9JM99 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Prg4Q9JM99 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Prg4Q9JM99 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Prg4Q9JM99 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Prg4Q9JM99 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Prg4Q9JM99 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Prg4Q9JM99 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Prg4Q9JM99 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Prg4Q9JM99 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC10.88□□□□□ -0.67
Prg4Q9JM99 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
Prg4Q9JM99 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC10.88□□□□□ -0.67
Prg4Q9JM99 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Prg4Q9JM99 Gm13910-201ENSMUST00000121752 1428 ntBASIC10.88□□□□□ -0.67
Prg4Q9JM99 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Prg4Q9JM99 B9d1os-201ENSMUST00000137010 674 ntBASIC10.88□□□□□ -0.67
Prg4Q9JM99 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Prg4Q9JM99 Gm12718-202ENSMUST00000156144 660 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Prg4Q9JM99 Sox5os1-201ENSMUST00000156994 1585 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Prg4Q9JM99 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Prg4Q9JM99 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC10.88□□□□□ -0.67
Prg4Q9JM99 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Prg4Q9JM99 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Prg4Q9JM99 Mir6979-201ENSMUST00000183927 56 ntBASIC10.88□□□□□ -0.67
Prg4Q9JM99 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC10.88□□□□□ -0.67
Prg4Q9JM99 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Prg4Q9JM99 Gm36943-201ENSMUST00000194422 282 ntBASIC10.88□□□□□ -0.67
Prg4Q9JM99 Gm38216-201ENSMUST00000194872 1214 ntBASIC10.88□□□□□ -0.67
Prg4Q9JM99 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC10.88□□□□□ -0.67
Prg4Q9JM99 Gm18393-201ENSMUST00000208349 1131 ntBASIC10.88□□□□□ -0.67
Prg4Q9JM99 Gm7940-201ENSMUST00000218195 769 ntBASIC10.88□□□□□ -0.67
Prg4Q9JM99 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Prg4Q9JM99 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Prg4Q9JM99 AC165260.5-201ENSMUST00000224640 1247 ntBASIC10.88□□□□□ -0.67
Prg4Q9JM99 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Prg4Q9JM99 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Prg4Q9JM99 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Prg4Q9JM99 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Prg4Q9JM99 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Prg4Q9JM99 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Prg4Q9JM99 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Prg4Q9JM99 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Prg4Q9JM99 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC10.88□□□□□ -0.67
Prg4Q9JM99 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Prg4Q9JM99 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Prg4Q9JM99 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Prg4Q9JM99 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Prg4Q9JM99 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Prg4Q9JM99 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
Prg4Q9JM99 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Prg4Q9JM99 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC10.88□□□□□ -0.67
Prg4Q9JM99 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Prg4Q9JM99 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Prg4Q9JM99 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Prg4Q9JM99 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Prg4Q9JM99 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Prg4Q9JM99 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC10.87□□□□□ -0.67
Prg4Q9JM99 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Prg4Q9JM99 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Prg4Q9JM99 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Prg4Q9JM99 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Prg4Q9JM99 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC10.87□□□□□ -0.67
Prg4Q9JM99 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Prg4Q9JM99 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
Prg4Q9JM99 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Prg4Q9JM99 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Prg4Q9JM99 Gm1840-201ENSMUST00000051687 1432 ntBASIC10.87□□□□□ -0.67
Prg4Q9JM99 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Prg4Q9JM99 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Prg4Q9JM99 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Prg4Q9JM99 Gm11331-201ENSMUST00000119764 288 ntBASIC10.87□□□□□ -0.67
Prg4Q9JM99 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC10.87□□□□□ -0.67
Prg4Q9JM99 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Prg4Q9JM99 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC10.87□□□□□ -0.67
Prg4Q9JM99 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Prg4Q9JM99 Gm10807-201ENSMUST00000177134 795 ntBASIC10.87□□□□□ -0.67
Prg4Q9JM99 Gm27530-201ENSMUST00000184096 98 ntBASIC10.87□□□□□ -0.67
Prg4Q9JM99 Mir8093-201ENSMUST00000185043 137 ntBASIC10.87□□□□□ -0.67
Prg4Q9JM99 Gm10774-201ENSMUST00000188689 204 ntBASIC10.87□□□□□ -0.67
Prg4Q9JM99 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC10.87□□□□□ -0.67
Prg4Q9JM99 Gm37835-201ENSMUST00000193305 361 ntBASIC10.87□□□□□ -0.67
Prg4Q9JM99 Gm34816-201ENSMUST00000193363 502 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Prg4Q9JM99 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC10.87□□□□□ -0.67
Prg4Q9JM99 AC122408.1-201ENSMUST00000218949 218 ntBASIC10.87□□□□□ -0.67
Prg4Q9JM99 AC154290.1-201ENSMUST00000223786 1240 ntBASIC10.87□□□□□ -0.67
Prg4Q9JM99 CT025552.1-201ENSMUST00000224561 521 ntBASIC10.87□□□□□ -0.67
Prg4Q9JM99 AC112945.1-201ENSMUST00000226413 514 ntBASIC10.87□□□□□ -0.67
Prg4Q9JM99 Gm1821-202ENSMUST00000227415 750 ntBASIC10.87□□□□□ -0.67
Prg4Q9JM99 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Prg4Q9JM99 Il2-201ENSMUST00000029275 1144 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Prg4Q9JM99 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Prg4Q9JM99 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Prg4Q9JM99 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Prg4Q9JM99 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Prg4Q9JM99 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Prg4Q9JM99 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 337.6 ms