Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim54Q9ERP3 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trim54Q9ERP3 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim54Q9ERP3 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim54Q9ERP3 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim54Q9ERP3 Gm8731-201ENSMUST00000118088 412 ntBASIC12.87□□□□□ -0.35
Trim54Q9ERP3 Gm15725-201ENSMUST00000119947 1090 ntBASIC12.87□□□□□ -0.35
Trim54Q9ERP3 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC12.87□□□□□ -0.35
Trim54Q9ERP3 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim54Q9ERP3 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC12.87□□□□□ -0.35
Trim54Q9ERP3 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12.87□□□□□ -0.35
Trim54Q9ERP3 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim54Q9ERP3 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim54Q9ERP3 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim54Q9ERP3 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim54Q9ERP3 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim54Q9ERP3 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.87□□□□□ -0.35
Trim54Q9ERP3 AC158355.1-201ENSMUST00000215895 1705 ntBASIC12.87□□□□□ -0.35
Trim54Q9ERP3 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim54Q9ERP3 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.87□□□□□ -0.35
Trim54Q9ERP3 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim54Q9ERP3 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim54Q9ERP3 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim54Q9ERP3 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim54Q9ERP3 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim54Q9ERP3 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.86□□□□□ -0.35
Trim54Q9ERP3 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim54Q9ERP3 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim54Q9ERP3 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim54Q9ERP3 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.86□□□□□ -0.35
Trim54Q9ERP3 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim54Q9ERP3 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim54Q9ERP3 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim54Q9ERP3 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim54Q9ERP3 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trim54Q9ERP3 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Trim54Q9ERP3 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim54Q9ERP3 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.86□□□□□ -0.35
Trim54Q9ERP3 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim54Q9ERP3 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim54Q9ERP3 n-R5s64-201ENSMUST00000102019 119 ntBASIC12.86□□□□□ -0.35
Trim54Q9ERP3 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim54Q9ERP3 Gm15782-201ENSMUST00000121073 445 ntBASIC12.86□□□□□ -0.35
Trim54Q9ERP3 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC12.86□□□□□ -0.35
Trim54Q9ERP3 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC12.86□□□□□ -0.35
Trim54Q9ERP3 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC12.86□□□□□ -0.35
Trim54Q9ERP3 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC12.86□□□□□ -0.35
Trim54Q9ERP3 Gm5778-201ENSMUST00000171003 1072 ntBASIC12.86□□□□□ -0.35
Trim54Q9ERP3 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim54Q9ERP3 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.86□□□□□ -0.35
Trim54Q9ERP3 Gm9540-201ENSMUST00000188230 478 ntBASIC12.86□□□□□ -0.35
Trim54Q9ERP3 Gm5714-201ENSMUST00000197343 566 ntBASIC12.86□□□□□ -0.35
Trim54Q9ERP3 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim54Q9ERP3 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC12.86□□□□□ -0.35
Trim54Q9ERP3 AC153505.1-201ENSMUST00000218819 1071 ntBASIC12.86□□□□□ -0.35
Trim54Q9ERP3 Gm6867-201ENSMUST00000219165 425 ntBASIC12.86□□□□□ -0.35
Trim54Q9ERP3 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC12.86□□□□□ -0.35
Trim54Q9ERP3 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC12.86□□□□□ -0.35
Trim54Q9ERP3 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Trim54Q9ERP3 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Trim54Q9ERP3 Snora73b-201ENSMUST00000083419 205 ntBASIC12.86□□□□□ -0.35
Trim54Q9ERP3 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim54Q9ERP3 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim54Q9ERP3 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim54Q9ERP3 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim54Q9ERP3 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim54Q9ERP3 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim54Q9ERP3 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim54Q9ERP3 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim54Q9ERP3 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Trim54Q9ERP3 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trim54Q9ERP3 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim54Q9ERP3 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim54Q9ERP3 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Trim54Q9ERP3 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim54Q9ERP3 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim54Q9ERP3 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim54Q9ERP3 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim54Q9ERP3 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim54Q9ERP3 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim54Q9ERP3 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim54Q9ERP3 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trim54Q9ERP3 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim54Q9ERP3 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim54Q9ERP3 Gm14193-201ENSMUST00000105067 153 ntBASIC12.85□□□□□ -0.35
Trim54Q9ERP3 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim54Q9ERP3 Gm15352-201ENSMUST00000118696 270 ntBASIC12.85□□□□□ -0.35
Trim54Q9ERP3 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim54Q9ERP3 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim54Q9ERP3 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC12.85□□□□□ -0.35
Trim54Q9ERP3 Gm2517-201ENSMUST00000215651 348 ntBASIC12.85□□□□□ -0.35
Trim54Q9ERP3 Gm2553-201ENSMUST00000215986 605 ntBASIC12.85□□□□□ -0.35
Trim54Q9ERP3 CT485607.1-201ENSMUST00000216100 85 ntBASIC12.85□□□□□ -0.35
Trim54Q9ERP3 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim54Q9ERP3 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.85□□□□□ -0.35
Trim54Q9ERP3 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim54Q9ERP3 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim54Q9ERP3 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.85□□□□□ -0.35
Trim54Q9ERP3 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
Trim54Q9ERP3 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 92.7 ms