Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.71□□□□□ -0.54
Lima1Q9ERG0 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Lima1Q9ERG0 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lima1Q9ERG0 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lima1Q9ERG0 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lima1Q9ERG0 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Lima1Q9ERG0 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Lima1Q9ERG0 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.71□□□□□ -0.54
Lima1Q9ERG0 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lima1Q9ERG0 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Lima1Q9ERG0 Gm21136-201ENSMUST00000186812 2575 ntBASIC11.71□□□□□ -0.54
Lima1Q9ERG0 Gm6605-201ENSMUST00000031488 2574 ntBASIC11.71□□□□□ -0.54
Lima1Q9ERG0 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lima1Q9ERG0 Gm38292-201ENSMUST00000192646 3045 ntBASIC11.7□□□□□ -0.54
Lima1Q9ERG0 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lima1Q9ERG0 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lima1Q9ERG0 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.7□□□□□ -0.54
Lima1Q9ERG0 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lima1Q9ERG0 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Lima1Q9ERG0 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lima1Q9ERG0 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lima1Q9ERG0 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Lima1Q9ERG0 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lima1Q9ERG0 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Lima1Q9ERG0 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.7□□□□□ -0.54
Lima1Q9ERG0 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.7□□□□□ -0.54
Lima1Q9ERG0 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lima1Q9ERG0 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lima1Q9ERG0 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lima1Q9ERG0 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
Lima1Q9ERG0 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lima1Q9ERG0 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC11.7□□□□□ -0.54
Lima1Q9ERG0 Gm18054-201ENSMUST00000207539 555 ntBASIC11.7□□□□□ -0.54
Lima1Q9ERG0 Gm39404-201ENSMUST00000216350 313 ntBASIC11.7□□□□□ -0.54
Lima1Q9ERG0 AC140406.1-201ENSMUST00000226481 465 ntBASIC11.7□□□□□ -0.54
Lima1Q9ERG0 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lima1Q9ERG0 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lima1Q9ERG0 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC11.7□□□□□ -0.54
Lima1Q9ERG0 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lima1Q9ERG0 Gm8420-201ENSMUST00000097103 598 ntBASIC11.7□□□□□ -0.54
Lima1Q9ERG0 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lima1Q9ERG0 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lima1Q9ERG0 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.7□□□□□ -0.54
Lima1Q9ERG0 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lima1Q9ERG0 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lima1Q9ERG0 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lima1Q9ERG0 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Lima1Q9ERG0 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lima1Q9ERG0 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lima1Q9ERG0 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lima1Q9ERG0 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lima1Q9ERG0 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lima1Q9ERG0 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lima1Q9ERG0 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lima1Q9ERG0 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Lima1Q9ERG0 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lima1Q9ERG0 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lima1Q9ERG0 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lima1Q9ERG0 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Lima1Q9ERG0 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lima1Q9ERG0 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Lima1Q9ERG0 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lima1Q9ERG0 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Lima1Q9ERG0 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lima1Q9ERG0 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lima1Q9ERG0 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Lima1Q9ERG0 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lima1Q9ERG0 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.69□□□□□ -0.54
Lima1Q9ERG0 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.69□□□□□ -0.54
Lima1Q9ERG0 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lima1Q9ERG0 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lima1Q9ERG0 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lima1Q9ERG0 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lima1Q9ERG0 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lima1Q9ERG0 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lima1Q9ERG0 Gm10434-201ENSMUST00000101158 471 ntBASIC11.69□□□□□ -0.54
Lima1Q9ERG0 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lima1Q9ERG0 Gm14127-201ENSMUST00000117906 678 ntBASIC11.69□□□□□ -0.54
Lima1Q9ERG0 Gm13875-201ENSMUST00000120162 282 ntBASIC11.69□□□□□ -0.54
Lima1Q9ERG0 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lima1Q9ERG0 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11.69□□□□□ -0.54
Lima1Q9ERG0 Mospd4-201ENSMUST00000180618 576 ntBASIC11.69□□□□□ -0.54
Lima1Q9ERG0 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.69□□□□□ -0.54
Lima1Q9ERG0 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Lima1Q9ERG0 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.69□□□□□ -0.54
Lima1Q9ERG0 Gm43118-201ENSMUST00000199149 775 ntBASIC11.69□□□□□ -0.54
Lima1Q9ERG0 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC11.69□□□□□ -0.54
Lima1Q9ERG0 Gm44958-201ENSMUST00000203734 736 ntBASIC11.69□□□□□ -0.54
Lima1Q9ERG0 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lima1Q9ERG0 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.69□□□□□ -0.54
Lima1Q9ERG0 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lima1Q9ERG0 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lima1Q9ERG0 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lima1Q9ERG0 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Lima1Q9ERG0 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lima1Q9ERG0 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lima1Q9ERG0 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lima1Q9ERG0 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lima1Q9ERG0 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Lima1Q9ERG0 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms