Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cpne8Q9DC53 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cpne8Q9DC53 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cpne8Q9DC53 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.33□□□□□ -0.44
Cpne8Q9DC53 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cpne8Q9DC53 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cpne8Q9DC53 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cpne8Q9DC53 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.33□□□□□ -0.44
Cpne8Q9DC53 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cpne8Q9DC53 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cpne8Q9DC53 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.33□□□□□ -0.44
Cpne8Q9DC53 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cpne8Q9DC53 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cpne8Q9DC53 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cpne8Q9DC53 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Cpne8Q9DC53 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Cpne8Q9DC53 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cpne8Q9DC53 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cpne8Q9DC53 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Cpne8Q9DC53 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cpne8Q9DC53 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cpne8Q9DC53 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cpne8Q9DC53 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cpne8Q9DC53 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cpne8Q9DC53 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpne8Q9DC53 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cpne8Q9DC53 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpne8Q9DC53 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cpne8Q9DC53 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpne8Q9DC53 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC12.32□□□□□ -0.44
Cpne8Q9DC53 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpne8Q9DC53 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpne8Q9DC53 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cpne8Q9DC53 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Cpne8Q9DC53 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cpne8Q9DC53 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Cpne8Q9DC53 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpne8Q9DC53 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Cpne8Q9DC53 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpne8Q9DC53 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cpne8Q9DC53 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpne8Q9DC53 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpne8Q9DC53 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.32□□□□□ -0.44
Cpne8Q9DC53 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpne8Q9DC53 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.32□□□□□ -0.44
Cpne8Q9DC53 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Cpne8Q9DC53 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Cpne8Q9DC53 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.32□□□□□ -0.44
Cpne8Q9DC53 Gm32999-201ENSMUST00000192693 562 ntBASIC12.32□□□□□ -0.44
Cpne8Q9DC53 Gm43179-201ENSMUST00000198797 275 ntBASIC12.32□□□□□ -0.44
Cpne8Q9DC53 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cpne8Q9DC53 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.32□□□□□ -0.44
Cpne8Q9DC53 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpne8Q9DC53 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpne8Q9DC53 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Cpne8Q9DC53 Gm10254-201ENSMUST00000052888 867 ntBASIC12.32□□□□□ -0.44
Cpne8Q9DC53 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cpne8Q9DC53 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cpne8Q9DC53 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpne8Q9DC53 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpne8Q9DC53 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cpne8Q9DC53 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpne8Q9DC53 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpne8Q9DC53 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cpne8Q9DC53 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpne8Q9DC53 Gm44755-201ENSMUST00000207830 2102 ntBASIC12.32□□□□□ -0.44
Cpne8Q9DC53 Gm43908-201ENSMUST00000205074 1472 ntBASIC12.32□□□□□ -0.44
Cpne8Q9DC53 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Cpne8Q9DC53 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Cpne8Q9DC53 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpne8Q9DC53 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Cpne8Q9DC53 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpne8Q9DC53 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpne8Q9DC53 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Cpne8Q9DC53 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpne8Q9DC53 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC12.32□□□□□ -0.44
Cpne8Q9DC53 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpne8Q9DC53 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Cpne8Q9DC53 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpne8Q9DC53 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpne8Q9DC53 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cpne8Q9DC53 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.31□□□□□ -0.44
Cpne8Q9DC53 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cpne8Q9DC53 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC12.31□□□□□ -0.44
Cpne8Q9DC53 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cpne8Q9DC53 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Cpne8Q9DC53 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.31□□□□□ -0.44
Cpne8Q9DC53 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cpne8Q9DC53 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Cpne8Q9DC53 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cpne8Q9DC53 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC12.31□□□□□ -0.44
Cpne8Q9DC53 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cpne8Q9DC53 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cpne8Q9DC53 Gm26286-201ENSMUST00000104166 134 ntBASIC12.31□□□□□ -0.44
Cpne8Q9DC53 Gm11509-201ENSMUST00000117358 325 ntBASIC12.31□□□□□ -0.44
Cpne8Q9DC53 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Cpne8Q9DC53 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cpne8Q9DC53 Gm6114-201ENSMUST00000182472 968 ntBASIC12.31□□□□□ -0.44
Cpne8Q9DC53 Gm38241-201ENSMUST00000192641 898 ntBASIC12.31□□□□□ -0.44
Cpne8Q9DC53 Gm7003-201ENSMUST00000195089 312 ntBASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms