Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC12.38□□□□□ -0.43
Chmp2aQ9DB34 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp2aQ9DB34 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp2aQ9DB34 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Chmp2aQ9DB34 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC12.38□□□□□ -0.43
Chmp2aQ9DB34 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp2aQ9DB34 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC12.38□□□□□ -0.43
Chmp2aQ9DB34 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.38□□□□□ -0.43
Chmp2aQ9DB34 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp2aQ9DB34 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp2aQ9DB34 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Chmp2aQ9DB34 Gm8956-201ENSMUST00000203939 825 ntBASIC12.38□□□□□ -0.43
Chmp2aQ9DB34 Gm18730-201ENSMUST00000218038 343 ntBASIC12.38□□□□□ -0.43
Chmp2aQ9DB34 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp2aQ9DB34 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.38□□□□□ -0.43
Chmp2aQ9DB34 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.38□□□□□ -0.43
Chmp2aQ9DB34 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp2aQ9DB34 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp2aQ9DB34 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp2aQ9DB34 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp2aQ9DB34 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp2aQ9DB34 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp2aQ9DB34 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp2aQ9DB34 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp2aQ9DB34 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chmp2aQ9DB34 Gm10152-201ENSMUST00000193475 1344 ntBASIC12.37□□□□□ -0.43
Chmp2aQ9DB34 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp2aQ9DB34 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp2aQ9DB34 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp2aQ9DB34 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Chmp2aQ9DB34 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp2aQ9DB34 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp2aQ9DB34 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp2aQ9DB34 Gm23949-201ENSMUST00000104027 127 ntBASIC12.37□□□□□ -0.43
Chmp2aQ9DB34 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC12.37□□□□□ -0.43
Chmp2aQ9DB34 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp2aQ9DB34 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp2aQ9DB34 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Chmp2aQ9DB34 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.37□□□□□ -0.43
Chmp2aQ9DB34 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Chmp2aQ9DB34 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC12.37□□□□□ -0.43
Chmp2aQ9DB34 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC12.37□□□□□ -0.43
Chmp2aQ9DB34 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp2aQ9DB34 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp2aQ9DB34 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp2aQ9DB34 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp2aQ9DB34 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp2aQ9DB34 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp2aQ9DB34 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Chmp2aQ9DB34 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp2aQ9DB34 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.37□□□□□ -0.43
Chmp2aQ9DB34 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.37□□□□□ -0.43
Chmp2aQ9DB34 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.37□□□□□ -0.43
Chmp2aQ9DB34 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp2aQ9DB34 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp2aQ9DB34 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp2aQ9DB34 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp2aQ9DB34 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Chmp2aQ9DB34 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp2aQ9DB34 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp2aQ9DB34 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.37□□□□□ -0.43
Chmp2aQ9DB34 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Chmp2aQ9DB34 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp2aQ9DB34 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.36□□□□□ -0.43
Chmp2aQ9DB34 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp2aQ9DB34 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp2aQ9DB34 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.36□□□□□ -0.43
Chmp2aQ9DB34 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC12.36□□□□□ -0.43
Chmp2aQ9DB34 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp2aQ9DB34 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp2aQ9DB34 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp2aQ9DB34 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.36□□□□□ -0.43
Chmp2aQ9DB34 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Chmp2aQ9DB34 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Chmp2aQ9DB34 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.36□□□□□ -0.43
Chmp2aQ9DB34 Gm9136-201ENSMUST00000193368 454 ntBASIC12.36□□□□□ -0.43
Chmp2aQ9DB34 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.36□□□□□ -0.43
Chmp2aQ9DB34 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp2aQ9DB34 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp2aQ9DB34 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp2aQ9DB34 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Chmp2aQ9DB34 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.36□□□□□ -0.43
Chmp2aQ9DB34 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp2aQ9DB34 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp2aQ9DB34 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.36□□□□□ -0.43
Chmp2aQ9DB34 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Chmp2aQ9DB34 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp2aQ9DB34 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.36□□□□□ -0.43
Chmp2aQ9DB34 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp2aQ9DB34 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.36□□□□□ -0.43
Chmp2aQ9DB34 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Chmp2aQ9DB34 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Chmp2aQ9DB34 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Chmp2aQ9DB34 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp2aQ9DB34 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp2aQ9DB34 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp2aQ9DB34 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Chmp2aQ9DB34 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Chmp2aQ9DB34 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Chmp2aQ9DB34 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms