Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp4cQ9D7F7 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp4cQ9D7F7 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp4cQ9D7F7 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp4cQ9D7F7 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp4cQ9D7F7 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp4cQ9D7F7 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp4cQ9D7F7 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp4cQ9D7F7 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp4cQ9D7F7 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Chmp4cQ9D7F7 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp4cQ9D7F7 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC14.17□□□□□ -0.14
Chmp4cQ9D7F7 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Chmp4cQ9D7F7 Gm15172-201ENSMUST00000118945 1046 ntBASIC14.17□□□□□ -0.14
Chmp4cQ9D7F7 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Chmp4cQ9D7F7 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp4cQ9D7F7 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC14.17□□□□□ -0.14
Chmp4cQ9D7F7 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp4cQ9D7F7 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC14.17□□□□□ -0.14
Chmp4cQ9D7F7 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC14.17□□□□□ -0.14
Chmp4cQ9D7F7 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Chmp4cQ9D7F7 Gm42693-201ENSMUST00000196779 631 ntBASIC14.17□□□□□ -0.14
Chmp4cQ9D7F7 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp4cQ9D7F7 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC14.17□□□□□ -0.14
Chmp4cQ9D7F7 Gm44974-201ENSMUST00000206387 1279 ntBASIC14.17□□□□□ -0.14
Chmp4cQ9D7F7 AC166344.1-202ENSMUST00000224139 234 ntBASIC14.17□□□□□ -0.14
Chmp4cQ9D7F7 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC14.17□□□□□ -0.14
Chmp4cQ9D7F7 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp4cQ9D7F7 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp4cQ9D7F7 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Chmp4cQ9D7F7 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC14.17□□□□□ -0.14
Chmp4cQ9D7F7 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Chmp4cQ9D7F7 Gm9200-201ENSMUST00000118513 1354 ntBASIC14.17□□□□□ -0.14
Chmp4cQ9D7F7 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp4cQ9D7F7 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Chmp4cQ9D7F7 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp4cQ9D7F7 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp4cQ9D7F7 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp4cQ9D7F7 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp4cQ9D7F7 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp4cQ9D7F7 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp4cQ9D7F7 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp4cQ9D7F7 Gm37600-201ENSMUST00000193764 3292 ntBASIC14.17□□□□□ -0.14
Chmp4cQ9D7F7 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp4cQ9D7F7 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp4cQ9D7F7 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp4cQ9D7F7 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Chmp4cQ9D7F7 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp4cQ9D7F7 Gm21939-201ENSMUST00000221137 2773 ntBASIC14.17□□□□□ -0.14
Chmp4cQ9D7F7 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp4cQ9D7F7 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp4cQ9D7F7 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp4cQ9D7F7 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp4cQ9D7F7 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC14.16□□□□□ -0.14
Chmp4cQ9D7F7 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp4cQ9D7F7 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp4cQ9D7F7 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp4cQ9D7F7 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp4cQ9D7F7 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp4cQ9D7F7 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp4cQ9D7F7 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Chmp4cQ9D7F7 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Chmp4cQ9D7F7 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Chmp4cQ9D7F7 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Chmp4cQ9D7F7 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Chmp4cQ9D7F7 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Chmp4cQ9D7F7 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC14.16□□□□□ -0.14
Chmp4cQ9D7F7 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp4cQ9D7F7 Gm5940-201ENSMUST00000117582 1068 ntBASIC14.16□□□□□ -0.14
Chmp4cQ9D7F7 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC14.16□□□□□ -0.14
Chmp4cQ9D7F7 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp4cQ9D7F7 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC14.16□□□□□ -0.14
Chmp4cQ9D7F7 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC14.16□□□□□ -0.14
Chmp4cQ9D7F7 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC14.16□□□□□ -0.14
Chmp4cQ9D7F7 Gm26956-201ENSMUST00000182176 986 ntBASIC14.16□□□□□ -0.14
Chmp4cQ9D7F7 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC14.16□□□□□ -0.14
Chmp4cQ9D7F7 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC14.16□□□□□ -0.14
Chmp4cQ9D7F7 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC14.16□□□□□ -0.14
Chmp4cQ9D7F7 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp4cQ9D7F7 AC163667.3-201ENSMUST00000225774 222 ntBASIC14.16□□□□□ -0.14
Chmp4cQ9D7F7 Gm7399-201ENSMUST00000032395 858 ntBASIC14.16□□□□□ -0.14
Chmp4cQ9D7F7 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp4cQ9D7F7 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp4cQ9D7F7 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Chmp4cQ9D7F7 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp4cQ9D7F7 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp4cQ9D7F7 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp4cQ9D7F7 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp4cQ9D7F7 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp4cQ9D7F7 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp4cQ9D7F7 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Chmp4cQ9D7F7 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Chmp4cQ9D7F7 Gm8862-201ENSMUST00000198379 1346 ntBASIC14.15□□□□□ -0.14
Chmp4cQ9D7F7 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp4cQ9D7F7 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Chmp4cQ9D7F7 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp4cQ9D7F7 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC14.15□□□□□ -0.14
Chmp4cQ9D7F7 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp4cQ9D7F7 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp4cQ9D7F7 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms