Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shmt2Q9CZN7 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Shmt2Q9CZN7 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shmt2Q9CZN7 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shmt2Q9CZN7 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.35□□□□□ -0.59
Shmt2Q9CZN7 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shmt2Q9CZN7 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shmt2Q9CZN7 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.35□□□□□ -0.59
Shmt2Q9CZN7 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shmt2Q9CZN7 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.35□□□□□ -0.59
Shmt2Q9CZN7 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shmt2Q9CZN7 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shmt2Q9CZN7 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Shmt2Q9CZN7 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shmt2Q9CZN7 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Shmt2Q9CZN7 BC043934-202ENSMUST00000185694 2356 ntBASIC11.34□□□□□ -0.59
Shmt2Q9CZN7 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shmt2Q9CZN7 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shmt2Q9CZN7 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shmt2Q9CZN7 Gm36957-201ENSMUST00000192982 2824 ntBASIC11.34□□□□□ -0.59
Shmt2Q9CZN7 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shmt2Q9CZN7 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shmt2Q9CZN7 Gm10782-202ENSMUST00000223775 1480 ntBASIC11.34□□□□□ -0.59
Shmt2Q9CZN7 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC11.34□□□□□ -0.59
Shmt2Q9CZN7 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shmt2Q9CZN7 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC11.34□□□□□ -0.59
Shmt2Q9CZN7 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Shmt2Q9CZN7 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Shmt2Q9CZN7 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shmt2Q9CZN7 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Shmt2Q9CZN7 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC11.34□□□□□ -0.59
Shmt2Q9CZN7 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC11.34□□□□□ -0.59
Shmt2Q9CZN7 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC11.34□□□□□ -0.59
Shmt2Q9CZN7 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shmt2Q9CZN7 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.34□□□□□ -0.59
Shmt2Q9CZN7 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shmt2Q9CZN7 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Shmt2Q9CZN7 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shmt2Q9CZN7 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shmt2Q9CZN7 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shmt2Q9CZN7 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.34□□□□□ -0.59
Shmt2Q9CZN7 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Shmt2Q9CZN7 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shmt2Q9CZN7 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shmt2Q9CZN7 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Shmt2Q9CZN7 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shmt2Q9CZN7 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.34□□□□□ -0.59
Shmt2Q9CZN7 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Shmt2Q9CZN7 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.59
Shmt2Q9CZN7 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.33□□□□□ -0.6
Shmt2Q9CZN7 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Shmt2Q9CZN7 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Shmt2Q9CZN7 Gm43963-201ENSMUST00000203466 2488 ntBASIC11.33□□□□□ -0.6
Shmt2Q9CZN7 Gm40377-201ENSMUST00000204604 2015 ntBASIC11.33□□□□□ -0.6
Shmt2Q9CZN7 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shmt2Q9CZN7 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shmt2Q9CZN7 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shmt2Q9CZN7 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shmt2Q9CZN7 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.33□□□□□ -0.6
Shmt2Q9CZN7 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Shmt2Q9CZN7 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Shmt2Q9CZN7 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC11.33□□□□□ -0.6
Shmt2Q9CZN7 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC11.33□□□□□ -0.6
Shmt2Q9CZN7 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shmt2Q9CZN7 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Shmt2Q9CZN7 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.33□□□□□ -0.6
Shmt2Q9CZN7 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.33□□□□□ -0.6
Shmt2Q9CZN7 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shmt2Q9CZN7 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC11.33□□□□□ -0.6
Shmt2Q9CZN7 Gm8885-201ENSMUST00000189382 598 ntBASIC11.33□□□□□ -0.6
Shmt2Q9CZN7 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC11.33□□□□□ -0.6
Shmt2Q9CZN7 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shmt2Q9CZN7 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shmt2Q9CZN7 Gm9996-201ENSMUST00000070359 913 ntBASIC11.33□□□□□ -0.6
Shmt2Q9CZN7 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Shmt2Q9CZN7 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shmt2Q9CZN7 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shmt2Q9CZN7 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shmt2Q9CZN7 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.33□□□□□ -0.6
Shmt2Q9CZN7 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Shmt2Q9CZN7 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shmt2Q9CZN7 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shmt2Q9CZN7 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Shmt2Q9CZN7 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shmt2Q9CZN7 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
Shmt2Q9CZN7 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.33□□□□□ -0.6
Shmt2Q9CZN7 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Shmt2Q9CZN7 Gm37931-201ENSMUST00000194686 2866 ntBASIC11.33□□□□□ -0.6
Shmt2Q9CZN7 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shmt2Q9CZN7 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Shmt2Q9CZN7 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shmt2Q9CZN7 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Shmt2Q9CZN7 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shmt2Q9CZN7 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shmt2Q9CZN7 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shmt2Q9CZN7 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shmt2Q9CZN7 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shmt2Q9CZN7 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Shmt2Q9CZN7 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Shmt2Q9CZN7 Gm38194-201ENSMUST00000194529 2211 ntBASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms