Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC12.12□□□□□ -0.47
Cldnd1Q9CQX5 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.12□□□□□ -0.47
Cldnd1Q9CQX5 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cldnd1Q9CQX5 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cldnd1Q9CQX5 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cldnd1Q9CQX5 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cldnd1Q9CQX5 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cldnd1Q9CQX5 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC12.12□□□□□ -0.47
Cldnd1Q9CQX5 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cldnd1Q9CQX5 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cldnd1Q9CQX5 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cldnd1Q9CQX5 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cldnd1Q9CQX5 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cldnd1Q9CQX5 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cldnd1Q9CQX5 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cldnd1Q9CQX5 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.12□□□□□ -0.47
Cldnd1Q9CQX5 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cldnd1Q9CQX5 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cldnd1Q9CQX5 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cldnd1Q9CQX5 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cldnd1Q9CQX5 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cldnd1Q9CQX5 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cldnd1Q9CQX5 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.11□□□□□ -0.47
Cldnd1Q9CQX5 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Cldnd1Q9CQX5 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cldnd1Q9CQX5 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cldnd1Q9CQX5 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Cldnd1Q9CQX5 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cldnd1Q9CQX5 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cldnd1Q9CQX5 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cldnd1Q9CQX5 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cldnd1Q9CQX5 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cldnd1Q9CQX5 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cldnd1Q9CQX5 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cldnd1Q9CQX5 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cldnd1Q9CQX5 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cldnd1Q9CQX5 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC12.11□□□□□ -0.47
Cldnd1Q9CQX5 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cldnd1Q9CQX5 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cldnd1Q9CQX5 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC12.11□□□□□ -0.47
Cldnd1Q9CQX5 Gm12179-201ENSMUST00000118344 1272 ntBASIC12.11□□□□□ -0.47
Cldnd1Q9CQX5 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cldnd1Q9CQX5 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cldnd1Q9CQX5 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC12.11□□□□□ -0.47
Cldnd1Q9CQX5 Gm18776-201ENSMUST00000188833 654 ntBASIC12.11□□□□□ -0.47
Cldnd1Q9CQX5 Gm5340-201ENSMUST00000203733 880 ntBASIC12.11□□□□□ -0.47
Cldnd1Q9CQX5 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC12.11□□□□□ -0.47
Cldnd1Q9CQX5 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.11□□□□□ -0.47
Cldnd1Q9CQX5 Gm40879-201ENSMUST00000220759 612 ntBASIC12.11□□□□□ -0.47
Cldnd1Q9CQX5 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cldnd1Q9CQX5 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cldnd1Q9CQX5 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Cldnd1Q9CQX5 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Cldnd1Q9CQX5 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cldnd1Q9CQX5 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cldnd1Q9CQX5 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cldnd1Q9CQX5 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cldnd1Q9CQX5 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cldnd1Q9CQX5 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cldnd1Q9CQX5 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cldnd1Q9CQX5 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cldnd1Q9CQX5 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.11□□□□□ -0.47
Cldnd1Q9CQX5 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cldnd1Q9CQX5 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cldnd1Q9CQX5 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Cldnd1Q9CQX5 Gm18798-201ENSMUST00000187264 1700 ntBASIC12.11□□□□□ -0.47
Cldnd1Q9CQX5 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cldnd1Q9CQX5 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cldnd1Q9CQX5 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Cldnd1Q9CQX5 Gm8899-201ENSMUST00000214635 1332 ntBASIC12.11□□□□□ -0.47
Cldnd1Q9CQX5 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cldnd1Q9CQX5 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cldnd1Q9CQX5 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Cldnd1Q9CQX5 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.1□□□□□ -0.47
Cldnd1Q9CQX5 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cldnd1Q9CQX5 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cldnd1Q9CQX5 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.1□□□□□ -0.47
Cldnd1Q9CQX5 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.1□□□□□ -0.47
Cldnd1Q9CQX5 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cldnd1Q9CQX5 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cldnd1Q9CQX5 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.1□□□□□ -0.47
Cldnd1Q9CQX5 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cldnd1Q9CQX5 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cldnd1Q9CQX5 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cldnd1Q9CQX5 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.1□□□□□ -0.47
Cldnd1Q9CQX5 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Cldnd1Q9CQX5 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cldnd1Q9CQX5 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cldnd1Q9CQX5 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cldnd1Q9CQX5 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Cldnd1Q9CQX5 Gm22594-201ENSMUST00000104251 130 ntBASIC12.1□□□□□ -0.47
Cldnd1Q9CQX5 Gm13422-201ENSMUST00000118834 504 ntBASIC12.1□□□□□ -0.47
Cldnd1Q9CQX5 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Cldnd1Q9CQX5 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC12.1□□□□□ -0.47
Cldnd1Q9CQX5 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC12.1□□□□□ -0.47
Cldnd1Q9CQX5 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC12.1□□□□□ -0.47
Cldnd1Q9CQX5 Gm16167-201ENSMUST00000160428 1065 ntBASIC12.1□□□□□ -0.47
Cldnd1Q9CQX5 Gm20414-201ENSMUST00000172918 646 ntBASIC12.1□□□□□ -0.47
Cldnd1Q9CQX5 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC12.1□□□□□ -0.47
Cldnd1Q9CQX5 Gm18801-201ENSMUST00000186616 536 ntBASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms