Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC9.61□□□□□ -0.87
RTRAFQ9CQE8 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
RTRAFQ9CQE8 D030055H07Rik-202ENSMUST00000150953 4325 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
RTRAFQ9CQE8 Ipo7-201ENSMUST00000084731 4763 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
RTRAFQ9CQE8 AC167022.1-201ENSMUST00000218647 1458 ntBASIC9.61□□□□□ -0.87
RTRAFQ9CQE8 Dync1h1-201ENSMUST00000018851 14342 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
RTRAFQ9CQE8 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
RTRAFQ9CQE8 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
RTRAFQ9CQE8 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC9.61□□□□□ -0.87
RTRAFQ9CQE8 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
RTRAFQ9CQE8 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
RTRAFQ9CQE8 AC154314.2-201ENSMUST00000223677 3502 ntBASIC9.61□□□□□ -0.87
RTRAFQ9CQE8 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC9.61□□□□□ -0.87
RTRAFQ9CQE8 Tmem33-201ENSMUST00000037918 6247 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
RTRAFQ9CQE8 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC9.61□□□□□ -0.87
RTRAFQ9CQE8 Gm14719-201ENSMUST00000121891 340 ntBASIC9.61□□□□□ -0.87
RTRAFQ9CQE8 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
RTRAFQ9CQE8 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC9.61□□□□□ -0.87
RTRAFQ9CQE8 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC9.61□□□□□ -0.87
RTRAFQ9CQE8 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
RTRAFQ9CQE8 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC9.61□□□□□ -0.87
RTRAFQ9CQE8 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
RTRAFQ9CQE8 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
RTRAFQ9CQE8 AC153929.1-201ENSMUST00000219009 303 ntBASIC9.61□□□□□ -0.87
RTRAFQ9CQE8 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
RTRAFQ9CQE8 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
RTRAFQ9CQE8 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
RTRAFQ9CQE8 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
RTRAFQ9CQE8 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
RTRAFQ9CQE8 Zzef1-207ENSMUST00000172220 11249 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
RTRAFQ9CQE8 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
RTRAFQ9CQE8 Gpr155-204ENSMUST00000112044 4201 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
RTRAFQ9CQE8 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
RTRAFQ9CQE8 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
RTRAFQ9CQE8 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
RTRAFQ9CQE8 Gm36940-201ENSMUST00000194281 2036 ntBASIC9.61□□□□□ -0.87
RTRAFQ9CQE8 Zzef1-201ENSMUST00000069395 11150 ntAPPRIS P2 TSL 5 BASIC9.61□□□□□ -0.87
RTRAFQ9CQE8 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
RTRAFQ9CQE8 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
RTRAFQ9CQE8 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
RTRAFQ9CQE8 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
RTRAFQ9CQE8 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC9.61□□□□□ -0.87
RTRAFQ9CQE8 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
RTRAFQ9CQE8 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC9.6□□□□□ -0.87
RTRAFQ9CQE8 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
RTRAFQ9CQE8 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC9.6□□□□□ -0.87
RTRAFQ9CQE8 Zfp92-201ENSMUST00000033740 5767 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
RTRAFQ9CQE8 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
RTRAFQ9CQE8 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
RTRAFQ9CQE8 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
RTRAFQ9CQE8 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
RTRAFQ9CQE8 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
RTRAFQ9CQE8 Ciapin1-209ENSMUST00000162538 4359 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
RTRAFQ9CQE8 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC9.6□□□□□ -0.87
RTRAFQ9CQE8 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC9.6□□□□□ -0.87
RTRAFQ9CQE8 Gm42141-201ENSMUST00000196534 2172 ntBASIC9.6□□□□□ -0.87
RTRAFQ9CQE8 Epb41-202ENSMUST00000054917 4948 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
RTRAFQ9CQE8 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
RTRAFQ9CQE8 Gm38292-201ENSMUST00000192646 3045 ntBASIC9.6□□□□□ -0.87
RTRAFQ9CQE8 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC9.6□□□□□ -0.87
RTRAFQ9CQE8 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
RTRAFQ9CQE8 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
RTRAFQ9CQE8 Mlh3-202ENSMUST00000166821 5420 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
RTRAFQ9CQE8 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
RTRAFQ9CQE8 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
RTRAFQ9CQE8 Gm22189-201ENSMUST00000103822 86 ntBASIC9.6□□□□□ -0.87
RTRAFQ9CQE8 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
RTRAFQ9CQE8 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
RTRAFQ9CQE8 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
RTRAFQ9CQE8 Gm7558-201ENSMUST00000193221 1165 ntBASIC9.6□□□□□ -0.87
RTRAFQ9CQE8 Gm5276-201ENSMUST00000196683 1047 ntBASIC9.6□□□□□ -0.87
RTRAFQ9CQE8 Gm42612-201ENSMUST00000197986 623 ntBASIC9.6□□□□□ -0.87
RTRAFQ9CQE8 Gm43170-201ENSMUST00000199827 612 ntBASIC9.6□□□□□ -0.87
RTRAFQ9CQE8 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC9.6□□□□□ -0.87
RTRAFQ9CQE8 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
RTRAFQ9CQE8 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
RTRAFQ9CQE8 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
RTRAFQ9CQE8 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
RTRAFQ9CQE8 Shroom2-202ENSMUST00000101141 7494 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
RTRAFQ9CQE8 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
RTRAFQ9CQE8 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
RTRAFQ9CQE8 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
RTRAFQ9CQE8 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
RTRAFQ9CQE8 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
RTRAFQ9CQE8 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
RTRAFQ9CQE8 AC159195.3-201ENSMUST00000225162 2211 ntBASIC9.6□□□□□ -0.87
RTRAFQ9CQE8 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
RTRAFQ9CQE8 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
RTRAFQ9CQE8 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
RTRAFQ9CQE8 Bloc1s5-201ENSMUST00000035899 5634 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
RTRAFQ9CQE8 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
RTRAFQ9CQE8 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
RTRAFQ9CQE8 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
RTRAFQ9CQE8 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
RTRAFQ9CQE8 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
RTRAFQ9CQE8 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
RTRAFQ9CQE8 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
RTRAFQ9CQE8 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
RTRAFQ9CQE8 Rassf2-201ENSMUST00000028814 8233 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
RTRAFQ9CQE8 Gm44775-201ENSMUST00000207266 1456 ntBASIC9.59□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms