Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
Krt88Q9CPR6 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Krt88Q9CPR6 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Krt88Q9CPR6 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Krt88Q9CPR6 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Krt88Q9CPR6 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Krt88Q9CPR6 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Krt88Q9CPR6 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Krt88Q9CPR6 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Krt88Q9CPR6 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Krt88Q9CPR6 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Krt88Q9CPR6 Gm8131-201ENSMUST00000213783 1570 ntBASIC10.69□□□□□ -0.7
Krt88Q9CPR6 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC10.68□□□□□ -0.7
Krt88Q9CPR6 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Krt88Q9CPR6 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Krt88Q9CPR6 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Krt88Q9CPR6 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Krt88Q9CPR6 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Krt88Q9CPR6 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Krt88Q9CPR6 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Krt88Q9CPR6 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Krt88Q9CPR6 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Krt88Q9CPR6 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC10.68□□□□□ -0.7
Krt88Q9CPR6 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Krt88Q9CPR6 Gm43242-201ENSMUST00000199507 1776 ntBASIC10.68□□□□□ -0.7
Krt88Q9CPR6 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Krt88Q9CPR6 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Krt88Q9CPR6 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Krt88Q9CPR6 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Krt88Q9CPR6 Gm37969-201ENSMUST00000195777 3409 ntBASIC10.68□□□□□ -0.7
Krt88Q9CPR6 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Krt88Q9CPR6 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Krt88Q9CPR6 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC10.68□□□□□ -0.7
Krt88Q9CPR6 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Krt88Q9CPR6 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC10.68□□□□□ -0.7
Krt88Q9CPR6 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Krt88Q9CPR6 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC10.68□□□□□ -0.7
Krt88Q9CPR6 Gm9002-201ENSMUST00000178437 499 ntBASIC10.68□□□□□ -0.7
Krt88Q9CPR6 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Krt88Q9CPR6 Gm27892-201ENSMUST00000185017 106 ntBASIC10.68□□□□□ -0.7
Krt88Q9CPR6 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Krt88Q9CPR6 Gm43002-201ENSMUST00000200310 155 ntBASIC10.68□□□□□ -0.7
Krt88Q9CPR6 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC10.68□□□□□ -0.7
Krt88Q9CPR6 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Krt88Q9CPR6 Gm10268-201ENSMUST00000085340 555 ntBASIC10.68□□□□□ -0.7
Krt88Q9CPR6 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Krt88Q9CPR6 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC10.68□□□□□ -0.7
Krt88Q9CPR6 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Krt88Q9CPR6 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC10.68□□□□□ -0.7
Krt88Q9CPR6 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Krt88Q9CPR6 Gm37931-201ENSMUST00000194686 2866 ntBASIC10.68□□□□□ -0.7
Krt88Q9CPR6 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Krt88Q9CPR6 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC10.68□□□□□ -0.7
Krt88Q9CPR6 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Krt88Q9CPR6 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Krt88Q9CPR6 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Krt88Q9CPR6 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Krt88Q9CPR6 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Krt88Q9CPR6 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Krt88Q9CPR6 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Krt88Q9CPR6 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Krt88Q9CPR6 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC10.68□□□□□ -0.7
Krt88Q9CPR6 Gm44207-201ENSMUST00000204568 1424 ntBASIC10.67□□□□□ -0.7
Krt88Q9CPR6 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Krt88Q9CPR6 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Krt88Q9CPR6 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Krt88Q9CPR6 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Krt88Q9CPR6 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Krt88Q9CPR6 Gm7964-201ENSMUST00000051522 1378 ntBASIC10.67□□□□□ -0.7
Krt88Q9CPR6 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Krt88Q9CPR6 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Krt88Q9CPR6 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Krt88Q9CPR6 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Krt88Q9CPR6 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Krt88Q9CPR6 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Krt88Q9CPR6 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Krt88Q9CPR6 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Krt88Q9CPR6 Gm8155-201ENSMUST00000216363 1612 ntBASIC10.67□□□□□ -0.7
Krt88Q9CPR6 Gm9796-201ENSMUST00000062249 2250 ntBASIC10.67□□□□□ -0.7
Krt88Q9CPR6 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC10.67□□□□□ -0.7
Krt88Q9CPR6 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Krt88Q9CPR6 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Krt88Q9CPR6 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC10.67□□□□□ -0.7
Krt88Q9CPR6 Gm43433-201ENSMUST00000196573 481 ntBASIC10.67□□□□□ -0.7
Krt88Q9CPR6 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Krt88Q9CPR6 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Krt88Q9CPR6 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
Krt88Q9CPR6 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC10.67□□□□□ -0.7
Krt88Q9CPR6 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Krt88Q9CPR6 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Krt88Q9CPR6 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Krt88Q9CPR6 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Krt88Q9CPR6 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC10.67□□□□□ -0.7
Krt88Q9CPR6 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Krt88Q9CPR6 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Krt88Q9CPR6 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Krt88Q9CPR6 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Krt88Q9CPR6 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Krt88Q9CPR6 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Krt88Q9CPR6 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms