Protein–RNA interactions for Protein: Q99PM3

Gtf2a1, Transcription initiation factor IIA subunit 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2a1Q99PM3 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gtf2a1Q99PM3 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Gtf2a1Q99PM3 Ccdc62-202ENSMUST00000165148 3920 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Gtf2a1Q99PM3 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gtf2a1Q99PM3 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Gtf2a1Q99PM3 Slc34a2-201ENSMUST00000094787 4176 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gtf2a1Q99PM3 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gtf2a1Q99PM3 Zbtb8b-202ENSMUST00000106046 3323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gtf2a1Q99PM3 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Gtf2a1Q99PM3 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gtf2a1Q99PM3 Mrpl32-202ENSMUST00000220621 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gtf2a1Q99PM3 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gtf2a1Q99PM3 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Gtf2a1Q99PM3 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Gtf2a1Q99PM3 Gm9385-201ENSMUST00000117563 472 ntBASIC12.91□□□□□ -0.34
Gtf2a1Q99PM3 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC12.91□□□□□ -0.34
Gtf2a1Q99PM3 Gm15703-201ENSMUST00000120250 880 ntBASIC12.91□□□□□ -0.34
Gtf2a1Q99PM3 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC12.91□□□□□ -0.34
Gtf2a1Q99PM3 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.91□□□□□ -0.34
Gtf2a1Q99PM3 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC12.91□□□□□ -0.34
Gtf2a1Q99PM3 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC12.91□□□□□ -0.34
Gtf2a1Q99PM3 Umpk-ps-201ENSMUST00000211897 827 ntBASIC12.91□□□□□ -0.34
Gtf2a1Q99PM3 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC12.91□□□□□ -0.34
Gtf2a1Q99PM3 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Gtf2a1Q99PM3 Abca9-201ENSMUST00000044850 6384 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gtf2a1Q99PM3 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gtf2a1Q99PM3 Gm15590-201ENSMUST00000078419 552 ntBASIC12.91□□□□□ -0.34
Gtf2a1Q99PM3 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Gtf2a1Q99PM3 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gtf2a1Q99PM3 Olfr169-204ENSMUST00000216070 2328 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Gtf2a1Q99PM3 Oc90-201ENSMUST00000060522 1909 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gtf2a1Q99PM3 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Gtf2a1Q99PM3 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gtf2a1Q99PM3 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gtf2a1Q99PM3 Clip3-201ENSMUST00000014065 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gtf2a1Q99PM3 Pnpla3-201ENSMUST00000045289 4640 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Gtf2a1Q99PM3 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Gtf2a1Q99PM3 Mmp9-201ENSMUST00000017881 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gtf2a1Q99PM3 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Gtf2a1Q99PM3 Lhx9-201ENSMUST00000019374 4937 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Gtf2a1Q99PM3 Arhgap17-203ENSMUST00000167309 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gtf2a1Q99PM3 Gm42879-201ENSMUST00000198656 2214 ntBASIC12.9□□□□□ -0.34
Gtf2a1Q99PM3 Gm44745-201ENSMUST00000206563 2723 ntBASIC12.9□□□□□ -0.34
Gtf2a1Q99PM3 Uox-201ENSMUST00000029837 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gtf2a1Q99PM3 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC12.9□□□□□ -0.34
Gtf2a1Q99PM3 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Gtf2a1Q99PM3 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC12.9□□□□□ -0.34
Gtf2a1Q99PM3 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gtf2a1Q99PM3 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Gtf2a1Q99PM3 Zfp384-203ENSMUST00000084275 2829 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gtf2a1Q99PM3 Unc13d-209ENSMUST00000174822 3337 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gtf2a1Q99PM3 Gm13410-201ENSMUST00000117058 1415 ntBASIC12.9□□□□□ -0.34
Gtf2a1Q99PM3 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gtf2a1Q99PM3 Gm9103-201ENSMUST00000119371 405 ntBASIC12.9□□□□□ -0.34
Gtf2a1Q99PM3 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gtf2a1Q99PM3 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.9□□□□□ -0.34
Gtf2a1Q99PM3 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Gtf2a1Q99PM3 4930505M18Rik-201ENSMUST00000175854 1288 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Gtf2a1Q99PM3 Gm27628-201ENSMUST00000184911 107 ntBASIC12.9□□□□□ -0.34
Gtf2a1Q99PM3 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC12.9□□□□□ -0.34
Gtf2a1Q99PM3 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC12.9□□□□□ -0.34
Gtf2a1Q99PM3 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC12.9□□□□□ -0.34
Gtf2a1Q99PM3 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Gtf2a1Q99PM3 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gtf2a1Q99PM3 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gtf2a1Q99PM3 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Gtf2a1Q99PM3 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gtf2a1Q99PM3 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Gtf2a1Q99PM3 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Gtf2a1Q99PM3 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Gtf2a1Q99PM3 D030018L15Rik-202ENSMUST00000139808 1859 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Gtf2a1Q99PM3 AA474408-201ENSMUST00000098110 3339 ntBASIC12.9□□□□□ -0.34
Gtf2a1Q99PM3 Cyp51-201ENSMUST00000001507 3931 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gtf2a1Q99PM3 Adgrf3-201ENSMUST00000088117 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gtf2a1Q99PM3 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Gtf2a1Q99PM3 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Gtf2a1Q99PM3 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gtf2a1Q99PM3 Ncam1-201ENSMUST00000114476 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gtf2a1Q99PM3 Nuggc-201ENSMUST00000079469 2567 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Gtf2a1Q99PM3 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Gtf2a1Q99PM3 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gtf2a1Q99PM3 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Gtf2a1Q99PM3 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Gtf2a1Q99PM3 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Gtf2a1Q99PM3 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gtf2a1Q99PM3 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.9□□□□□ -0.35
Gtf2a1Q99PM3 Exoc7-201ENSMUST00000021147 3337 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Gtf2a1Q99PM3 AC122382.1-201ENSMUST00000225869 2371 ntBASIC12.89□□□□□ -0.35
Gtf2a1Q99PM3 Lpxn-201ENSMUST00000025601 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gtf2a1Q99PM3 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gtf2a1Q99PM3 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.89□□□□□ -0.35
Gtf2a1Q99PM3 Zfp60-208ENSMUST00000167955 2115 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Gtf2a1Q99PM3 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gtf2a1Q99PM3 Upk1b-201ENSMUST00000057767 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gtf2a1Q99PM3 Src-205ENSMUST00000109533 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gtf2a1Q99PM3 Gm26658-201ENSMUST00000181067 2500 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Gtf2a1Q99PM3 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gtf2a1Q99PM3 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.89□□□□□ -0.35
Gtf2a1Q99PM3 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gtf2a1Q99PM3 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms