Protein–RNA interactions for Protein: Q99N57

Raf1, RAF proto-oncogene serine/threonine-protein kinase, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raf1Q99N57 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Raf1Q99N57 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Raf1Q99N57 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Raf1Q99N57 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Raf1Q99N57 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Raf1Q99N57 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Raf1Q99N57 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Raf1Q99N57 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Raf1Q99N57 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Raf1Q99N57 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Raf1Q99N57 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Raf1Q99N57 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Raf1Q99N57 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC10.71□□□□□ -0.69
Raf1Q99N57 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Raf1Q99N57 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Raf1Q99N57 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC10.71□□□□□ -0.69
Raf1Q99N57 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
Raf1Q99N57 Gm11591-201ENSMUST00000120063 702 ntBASIC10.71□□□□□ -0.69
Raf1Q99N57 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC10.71□□□□□ -0.69
Raf1Q99N57 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC10.71□□□□□ -0.69
Raf1Q99N57 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC10.71□□□□□ -0.69
Raf1Q99N57 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC10.71□□□□□ -0.69
Raf1Q99N57 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC10.71□□□□□ -0.69
Raf1Q99N57 Gm7809-201ENSMUST00000153199 742 ntBASIC10.71□□□□□ -0.69
Raf1Q99N57 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Raf1Q99N57 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Raf1Q99N57 Gm8018-201ENSMUST00000173536 789 ntBASIC10.71□□□□□ -0.69
Raf1Q99N57 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Raf1Q99N57 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC10.71□□□□□ -0.69
Raf1Q99N57 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Raf1Q99N57 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Raf1Q99N57 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC10.71□□□□□ -0.69
Raf1Q99N57 Gm43289-201ENSMUST00000200537 1475 ntBASIC10.71□□□□□ -0.69
Raf1Q99N57 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC10.71□□□□□ -0.69
Raf1Q99N57 Gm44958-201ENSMUST00000203734 736 ntBASIC10.71□□□□□ -0.69
Raf1Q99N57 Gm19692-201ENSMUST00000203856 2084 ntBASIC10.71□□□□□ -0.69
Raf1Q99N57 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Raf1Q99N57 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC10.71□□□□□ -0.69
Raf1Q99N57 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC10.71□□□□□ -0.69
Raf1Q99N57 Gm7789-202ENSMUST00000211273 1400 ntBASIC10.71□□□□□ -0.69
Raf1Q99N57 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Raf1Q99N57 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Raf1Q99N57 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Raf1Q99N57 AC069562.3-201ENSMUST00000225387 587 ntBASIC10.71□□□□□ -0.69
Raf1Q99N57 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC10.71□□□□□ -0.69
Raf1Q99N57 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Raf1Q99N57 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Raf1Q99N57 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Raf1Q99N57 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Raf1Q99N57 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Raf1Q99N57 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Raf1Q99N57 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Raf1Q99N57 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Raf1Q99N57 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Raf1Q99N57 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Raf1Q99N57 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
Raf1Q99N57 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Raf1Q99N57 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Raf1Q99N57 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Raf1Q99N57 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Raf1Q99N57 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
Raf1Q99N57 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
Raf1Q99N57 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Raf1Q99N57 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC10.71□□□□□ -0.7
Raf1Q99N57 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Raf1Q99N57 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Raf1Q99N57 Gm9466-201ENSMUST00000218144 2246 ntBASIC10.7□□□□□ -0.7
Raf1Q99N57 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Raf1Q99N57 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Raf1Q99N57 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC10.7□□□□□ -0.7
Raf1Q99N57 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Raf1Q99N57 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Raf1Q99N57 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Raf1Q99N57 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Raf1Q99N57 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Raf1Q99N57 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Raf1Q99N57 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Raf1Q99N57 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Raf1Q99N57 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Raf1Q99N57 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Raf1Q99N57 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Raf1Q99N57 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Raf1Q99N57 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
Raf1Q99N57 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Raf1Q99N57 Gm11222-201ENSMUST00000119005 738 ntBASIC10.7□□□□□ -0.7
Raf1Q99N57 Gm9083-201ENSMUST00000120423 819 ntBASIC10.7□□□□□ -0.7
Raf1Q99N57 Gm11597-201ENSMUST00000121423 964 ntBASIC10.7□□□□□ -0.7
Raf1Q99N57 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC10.7□□□□□ -0.7
Raf1Q99N57 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Raf1Q99N57 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Raf1Q99N57 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC10.7□□□□□ -0.7
Raf1Q99N57 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC10.7□□□□□ -0.7
Raf1Q99N57 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC10.7□□□□□ -0.7
Raf1Q99N57 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Raf1Q99N57 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC10.7□□□□□ -0.7
Raf1Q99N57 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Raf1Q99N57 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC10.7□□□□□ -0.7
Raf1Q99N57 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Raf1Q99N57 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Raf1Q99N57 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms