Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rnf111Q99ML9 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Rnf111Q99ML9 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rnf111Q99ML9 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Rnf111Q99ML9 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rnf111Q99ML9 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf111Q99ML9 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf111Q99ML9 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf111Q99ML9 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Rnf111Q99ML9 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Rnf111Q99ML9 Gm11222-201ENSMUST00000119005 738 ntBASIC11.52□□□□□ -0.57
Rnf111Q99ML9 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
Rnf111Q99ML9 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.52□□□□□ -0.57
Rnf111Q99ML9 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf111Q99ML9 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC11.52□□□□□ -0.57
Rnf111Q99ML9 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf111Q99ML9 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC11.52□□□□□ -0.57
Rnf111Q99ML9 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf111Q99ML9 Gm43179-201ENSMUST00000198797 275 ntBASIC11.52□□□□□ -0.57
Rnf111Q99ML9 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC11.52□□□□□ -0.57
Rnf111Q99ML9 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf111Q99ML9 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf111Q99ML9 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf111Q99ML9 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Rnf111Q99ML9 Gm17383-201ENSMUST00000078739 1041 ntBASIC11.52□□□□□ -0.57
Rnf111Q99ML9 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Rnf111Q99ML9 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf111Q99ML9 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf111Q99ML9 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Rnf111Q99ML9 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf111Q99ML9 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC11.52□□□□□ -0.57
Rnf111Q99ML9 Gm3836-201ENSMUST00000211377 1613 ntBASIC11.52□□□□□ -0.57
Rnf111Q99ML9 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf111Q99ML9 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf111Q99ML9 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Rnf111Q99ML9 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Rnf111Q99ML9 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Rnf111Q99ML9 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf111Q99ML9 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf111Q99ML9 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf111Q99ML9 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf111Q99ML9 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.51□□□□□ -0.57
Rnf111Q99ML9 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf111Q99ML9 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Rnf111Q99ML9 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf111Q99ML9 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.51□□□□□ -0.57
Rnf111Q99ML9 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.51□□□□□ -0.57
Rnf111Q99ML9 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf111Q99ML9 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Rnf111Q99ML9 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf111Q99ML9 Gm6560-201ENSMUST00000198588 1591 ntBASIC11.51□□□□□ -0.57
Rnf111Q99ML9 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf111Q99ML9 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf111Q99ML9 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf111Q99ML9 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC11.51□□□□□ -0.57
Rnf111Q99ML9 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf111Q99ML9 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf111Q99ML9 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf111Q99ML9 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Rnf111Q99ML9 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf111Q99ML9 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf111Q99ML9 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf111Q99ML9 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.51□□□□□ -0.57
Rnf111Q99ML9 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.51□□□□□ -0.57
Rnf111Q99ML9 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf111Q99ML9 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf111Q99ML9 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf111Q99ML9 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf111Q99ML9 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf111Q99ML9 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf111Q99ML9 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf111Q99ML9 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf111Q99ML9 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.51□□□□□ -0.57
Rnf111Q99ML9 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf111Q99ML9 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf111Q99ML9 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf111Q99ML9 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf111Q99ML9 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf111Q99ML9 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf111Q99ML9 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf111Q99ML9 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf111Q99ML9 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Rnf111Q99ML9 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf111Q99ML9 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf111Q99ML9 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Rnf111Q99ML9 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf111Q99ML9 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf111Q99ML9 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf111Q99ML9 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Rnf111Q99ML9 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf111Q99ML9 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf111Q99ML9 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.5□□□□□ -0.57
Rnf111Q99ML9 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.5□□□□□ -0.57
Rnf111Q99ML9 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf111Q99ML9 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rnf111Q99ML9 Gm24830-201ENSMUST00000102024 166 ntBASIC11.5□□□□□ -0.57
Rnf111Q99ML9 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Rnf111Q99ML9 Gm12036-201ENSMUST00000120008 530 ntBASIC11.5□□□□□ -0.57
Rnf111Q99ML9 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC11.5□□□□□ -0.57
Rnf111Q99ML9 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms