Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chmp1b1Q99LU0 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.24□□□□□ -0.61
Chmp1b1Q99LU0 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Chmp1b1Q99LU0 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chmp1b1Q99LU0 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Chmp1b1Q99LU0 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Chmp1b1Q99LU0 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chmp1b1Q99LU0 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chmp1b1Q99LU0 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chmp1b1Q99LU0 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chmp1b1Q99LU0 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chmp1b1Q99LU0 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chmp1b1Q99LU0 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Chmp1b1Q99LU0 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
Chmp1b1Q99LU0 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Chmp1b1Q99LU0 Gm14726-201ENSMUST00000120623 896 ntBASIC11.24□□□□□ -0.61
Chmp1b1Q99LU0 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Chmp1b1Q99LU0 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC11.24□□□□□ -0.61
Chmp1b1Q99LU0 Gm25668-201ENSMUST00000157700 129 ntBASIC11.24□□□□□ -0.61
Chmp1b1Q99LU0 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Chmp1b1Q99LU0 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Chmp1b1Q99LU0 Gm7584-201ENSMUST00000175829 940 ntBASIC11.24□□□□□ -0.61
Chmp1b1Q99LU0 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chmp1b1Q99LU0 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.24□□□□□ -0.61
Chmp1b1Q99LU0 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC11.24□□□□□ -0.61
Chmp1b1Q99LU0 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Chmp1b1Q99LU0 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chmp1b1Q99LU0 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chmp1b1Q99LU0 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chmp1b1Q99LU0 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chmp1b1Q99LU0 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Chmp1b1Q99LU0 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Chmp1b1Q99LU0 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Chmp1b1Q99LU0 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chmp1b1Q99LU0 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Chmp1b1Q99LU0 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Chmp1b1Q99LU0 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chmp1b1Q99LU0 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Chmp1b1Q99LU0 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chmp1b1Q99LU0 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.24□□□□□ -0.61
Chmp1b1Q99LU0 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Chmp1b1Q99LU0 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Chmp1b1Q99LU0 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chmp1b1Q99LU0 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chmp1b1Q99LU0 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chmp1b1Q99LU0 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chmp1b1Q99LU0 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Chmp1b1Q99LU0 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Chmp1b1Q99LU0 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chmp1b1Q99LU0 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
Chmp1b1Q99LU0 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chmp1b1Q99LU0 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chmp1b1Q99LU0 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chmp1b1Q99LU0 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Chmp1b1Q99LU0 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chmp1b1Q99LU0 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chmp1b1Q99LU0 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Chmp1b1Q99LU0 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chmp1b1Q99LU0 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.23□□□□□ -0.61
Chmp1b1Q99LU0 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Chmp1b1Q99LU0 Phf21a-202ENSMUST00000068702 6023 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
Chmp1b1Q99LU0 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chmp1b1Q99LU0 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Chmp1b1Q99LU0 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chmp1b1Q99LU0 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Chmp1b1Q99LU0 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chmp1b1Q99LU0 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC11.23□□□□□ -0.61
Chmp1b1Q99LU0 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.23□□□□□ -0.61
Chmp1b1Q99LU0 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Chmp1b1Q99LU0 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.23□□□□□ -0.61
Chmp1b1Q99LU0 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chmp1b1Q99LU0 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chmp1b1Q99LU0 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.23□□□□□ -0.61
Chmp1b1Q99LU0 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
Chmp1b1Q99LU0 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.23□□□□□ -0.61
Chmp1b1Q99LU0 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Chmp1b1Q99LU0 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chmp1b1Q99LU0 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Chmp1b1Q99LU0 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.23□□□□□ -0.61
Chmp1b1Q99LU0 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.23□□□□□ -0.61
Chmp1b1Q99LU0 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chmp1b1Q99LU0 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Chmp1b1Q99LU0 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chmp1b1Q99LU0 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chmp1b1Q99LU0 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chmp1b1Q99LU0 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Chmp1b1Q99LU0 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Chmp1b1Q99LU0 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chmp1b1Q99LU0 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Chmp1b1Q99LU0 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.23□□□□□ -0.61
Chmp1b1Q99LU0 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chmp1b1Q99LU0 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11.23□□□□□ -0.61
Chmp1b1Q99LU0 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chmp1b1Q99LU0 Megf10-201ENSMUST00000075770 7514 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chmp1b1Q99LU0 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chmp1b1Q99LU0 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chmp1b1Q99LU0 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Chmp1b1Q99LU0 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11.22□□□□□ -0.61
Chmp1b1Q99LU0 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chmp1b1Q99LU0 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms