Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Usp11Q99K46 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp11Q99K46 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.52□□□□□ -0.41
Usp11Q99K46 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp11Q99K46 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp11Q99K46 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp11Q99K46 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Usp11Q99K46 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Usp11Q99K46 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Usp11Q99K46 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp11Q99K46 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp11Q99K46 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.52□□□□□ -0.41
Usp11Q99K46 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp11Q99K46 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp11Q99K46 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp11Q99K46 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp11Q99K46 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp11Q99K46 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp11Q99K46 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp11Q99K46 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Usp11Q99K46 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp11Q99K46 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp11Q99K46 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Usp11Q99K46 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp11Q99K46 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp11Q99K46 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp11Q99K46 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Usp11Q99K46 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Usp11Q99K46 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Usp11Q99K46 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp11Q99K46 Gm24934-201ENSMUST00000103764 111 ntBASIC12.51□□□□□ -0.41
Usp11Q99K46 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Usp11Q99K46 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Usp11Q99K46 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.51□□□□□ -0.41
Usp11Q99K46 Gm14109-201ENSMUST00000118814 309 ntBASIC12.51□□□□□ -0.41
Usp11Q99K46 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.51□□□□□ -0.41
Usp11Q99K46 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.51□□□□□ -0.41
Usp11Q99K46 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Usp11Q99K46 Gm17376-201ENSMUST00000166016 84 ntBASIC12.51□□□□□ -0.41
Usp11Q99K46 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.51□□□□□ -0.41
Usp11Q99K46 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.51□□□□□ -0.41
Usp11Q99K46 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp11Q99K46 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.51□□□□□ -0.41
Usp11Q99K46 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.51□□□□□ -0.41
Usp11Q99K46 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp11Q99K46 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Usp11Q99K46 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp11Q99K46 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp11Q99K46 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.51□□□□□ -0.41
Usp11Q99K46 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp11Q99K46 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.51□□□□□ -0.41
Usp11Q99K46 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Usp11Q99K46 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC12.51□□□□□ -0.41
Usp11Q99K46 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp11Q99K46 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp11Q99K46 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp11Q99K46 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Usp11Q99K46 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp11Q99K46 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp11Q99K46 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.51□□□□□ -0.41
Usp11Q99K46 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usp11Q99K46 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Usp11Q99K46 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Usp11Q99K46 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usp11Q99K46 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Usp11Q99K46 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usp11Q99K46 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
Usp11Q99K46 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usp11Q99K46 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Usp11Q99K46 Gm26083-201ENSMUST00000157904 193 ntBASIC12.5□□□□□ -0.41
Usp11Q99K46 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.5□□□□□ -0.41
Usp11Q99K46 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usp11Q99K46 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.5□□□□□ -0.41
Usp11Q99K46 Gm38319-201ENSMUST00000194537 1266 ntBASIC12.5□□□□□ -0.41
Usp11Q99K46 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usp11Q99K46 Gm13097-201ENSMUST00000210722 397 ntBASIC12.5□□□□□ -0.41
Usp11Q99K46 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usp11Q99K46 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usp11Q99K46 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usp11Q99K46 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usp11Q99K46 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Usp11Q99K46 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usp11Q99K46 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usp11Q99K46 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Usp11Q99K46 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usp11Q99K46 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usp11Q99K46 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usp11Q99K46 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Usp11Q99K46 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usp11Q99K46 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.5□□□□□ -0.41
Usp11Q99K46 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.5□□□□□ -0.41
Usp11Q99K46 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Usp11Q99K46 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usp11Q99K46 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usp11Q99K46 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usp11Q99K46 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC12.5□□□□□ -0.41
Usp11Q99K46 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Usp11Q99K46 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usp11Q99K46 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usp11Q99K46 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms