Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tram1Q91V04 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC10.2□□□□□ -0.78
Tram1Q91V04 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tram1Q91V04 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tram1Q91V04 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC10.2□□□□□ -0.78
Tram1Q91V04 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Tram1Q91V04 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tram1Q91V04 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Tram1Q91V04 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tram1Q91V04 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Tram1Q91V04 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tram1Q91V04 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Tram1Q91V04 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Tram1Q91V04 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Tram1Q91V04 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Tram1Q91V04 Sez6l-205ENSMUST00000212480 5857 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Tram1Q91V04 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tram1Q91V04 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tram1Q91V04 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tram1Q91V04 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Tram1Q91V04 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC10.19□□□□□ -0.78
Tram1Q91V04 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Tram1Q91V04 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Tram1Q91V04 Myo5a-206ENSMUST00000136731 6480 ntAPPRIS ALT1 TSL 5 BASIC10.19□□□□□ -0.78
Tram1Q91V04 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Tram1Q91V04 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Tram1Q91V04 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Tram1Q91V04 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Tram1Q91V04 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Tram1Q91V04 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Tram1Q91V04 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Tram1Q91V04 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Tram1Q91V04 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Tram1Q91V04 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC10.19□□□□□ -0.78
Tram1Q91V04 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Tram1Q91V04 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Tram1Q91V04 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC10.19□□□□□ -0.78
Tram1Q91V04 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Tram1Q91V04 Gm11700-201ENSMUST00000119409 403 ntBASIC10.19□□□□□ -0.78
Tram1Q91V04 Gm11803-201ENSMUST00000119966 444 ntBASIC10.19□□□□□ -0.78
Tram1Q91V04 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Tram1Q91V04 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Tram1Q91V04 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Tram1Q91V04 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Tram1Q91V04 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC10.19□□□□□ -0.78
Tram1Q91V04 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC10.19□□□□□ -0.78
Tram1Q91V04 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Tram1Q91V04 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Tram1Q91V04 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Tram1Q91V04 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC10.19□□□□□ -0.78
Tram1Q91V04 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC10.19□□□□□ -0.78
Tram1Q91V04 Gm44872-201ENSMUST00000207864 420 ntBASIC10.19□□□□□ -0.78
Tram1Q91V04 AC125209.1-201ENSMUST00000225812 766 ntBASIC10.19□□□□□ -0.78
Tram1Q91V04 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Tram1Q91V04 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Tram1Q91V04 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
Tram1Q91V04 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Tram1Q91V04 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Tram1Q91V04 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Tram1Q91V04 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Tram1Q91V04 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Tram1Q91V04 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Tram1Q91V04 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Tram1Q91V04 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Tram1Q91V04 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC10.19□□□□□ -0.78
Tram1Q91V04 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Tram1Q91V04 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC10.19□□□□□ -0.78
Tram1Q91V04 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Tram1Q91V04 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Tram1Q91V04 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Tram1Q91V04 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tram1Q91V04 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Tram1Q91V04 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC10.18□□□□□ -0.78
Tram1Q91V04 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tram1Q91V04 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tram1Q91V04 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tram1Q91V04 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Tram1Q91V04 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tram1Q91V04 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tram1Q91V04 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC10.18□□□□□ -0.78
Tram1Q91V04 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
Tram1Q91V04 Gm42141-201ENSMUST00000196534 2172 ntBASIC10.18□□□□□ -0.78
Tram1Q91V04 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tram1Q91V04 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC10.18□□□□□ -0.78
Tram1Q91V04 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tram1Q91V04 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tram1Q91V04 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Tram1Q91V04 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Tram1Q91V04 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Tram1Q91V04 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Tram1Q91V04 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC10.18□□□□□ -0.78
Tram1Q91V04 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Tram1Q91V04 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Tram1Q91V04 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC10.18□□□□□ -0.78
Tram1Q91V04 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Tram1Q91V04 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC10.18□□□□□ -0.78
Tram1Q91V04 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC10.18□□□□□ -0.78
Tram1Q91V04 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC10.18□□□□□ -0.78
Tram1Q91V04 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC10.18□□□□□ -0.78
Tram1Q91V04 Gm8494-201ENSMUST00000178171 1233 ntBASIC10.18□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 90.9 ms