Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx39aQ8VDW0 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx39aQ8VDW0 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx39aQ8VDW0 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx39aQ8VDW0 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx39aQ8VDW0 Gm22920-201ENSMUST00000102175 109 ntBASIC13.16□□□□□ -0.3
Ddx39aQ8VDW0 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx39aQ8VDW0 Gm11246-201ENSMUST00000120880 345 ntBASIC13.16□□□□□ -0.3
Ddx39aQ8VDW0 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx39aQ8VDW0 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx39aQ8VDW0 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC13.16□□□□□ -0.3
Ddx39aQ8VDW0 Ighv1-60-201ENSMUST00000195816 405 ntBASIC13.16□□□□□ -0.3
Ddx39aQ8VDW0 Gm9463-201ENSMUST00000206707 601 ntBASIC13.16□□□□□ -0.3
Ddx39aQ8VDW0 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC13.16□□□□□ -0.3
Ddx39aQ8VDW0 Gm2517-201ENSMUST00000215651 348 ntBASIC13.16□□□□□ -0.3
Ddx39aQ8VDW0 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Ddx39aQ8VDW0 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC13.16□□□□□ -0.3
Ddx39aQ8VDW0 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC13.16□□□□□ -0.3
Ddx39aQ8VDW0 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx39aQ8VDW0 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Ddx39aQ8VDW0 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx39aQ8VDW0 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Ddx39aQ8VDW0 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx39aQ8VDW0 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx39aQ8VDW0 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx39aQ8VDW0 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx39aQ8VDW0 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx39aQ8VDW0 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
Ddx39aQ8VDW0 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx39aQ8VDW0 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
Ddx39aQ8VDW0 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx39aQ8VDW0 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx39aQ8VDW0 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ddx39aQ8VDW0 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx39aQ8VDW0 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ddx39aQ8VDW0 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx39aQ8VDW0 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Ddx39aQ8VDW0 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx39aQ8VDW0 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx39aQ8VDW0 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx39aQ8VDW0 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ddx39aQ8VDW0 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx39aQ8VDW0 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.15□□□□□ -0.3
Ddx39aQ8VDW0 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Ddx39aQ8VDW0 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx39aQ8VDW0 Gm14193-201ENSMUST00000105067 153 ntBASIC13.15□□□□□ -0.3
Ddx39aQ8VDW0 Gm15352-201ENSMUST00000118696 270 ntBASIC13.15□□□□□ -0.3
Ddx39aQ8VDW0 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC13.15□□□□□ -0.3
Ddx39aQ8VDW0 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC13.15□□□□□ -0.3
Ddx39aQ8VDW0 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx39aQ8VDW0 Gm9540-201ENSMUST00000188230 478 ntBASIC13.15□□□□□ -0.3
Ddx39aQ8VDW0 Gm5852-201ENSMUST00000194119 1021 ntBASIC13.15□□□□□ -0.3
Ddx39aQ8VDW0 Gm8365-201ENSMUST00000197334 648 ntBASIC13.15□□□□□ -0.3
Ddx39aQ8VDW0 Gm43186-201ENSMUST00000198130 824 ntBASIC13.15□□□□□ -0.3
Ddx39aQ8VDW0 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx39aQ8VDW0 AC153505.1-201ENSMUST00000218819 1071 ntBASIC13.15□□□□□ -0.3
Ddx39aQ8VDW0 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx39aQ8VDW0 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx39aQ8VDW0 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Ddx39aQ8VDW0 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx39aQ8VDW0 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx39aQ8VDW0 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx39aQ8VDW0 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx39aQ8VDW0 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx39aQ8VDW0 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
Ddx39aQ8VDW0 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Ddx39aQ8VDW0 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Ddx39aQ8VDW0 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx39aQ8VDW0 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx39aQ8VDW0 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx39aQ8VDW0 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Ddx39aQ8VDW0 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx39aQ8VDW0 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx39aQ8VDW0 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx39aQ8VDW0 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx39aQ8VDW0 Gm8522-201ENSMUST00000118416 1929 ntBASIC13.14□□□□□ -0.31
Ddx39aQ8VDW0 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Ddx39aQ8VDW0 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx39aQ8VDW0 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx39aQ8VDW0 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx39aQ8VDW0 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx39aQ8VDW0 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Ddx39aQ8VDW0 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx39aQ8VDW0 Gm11949-201ENSMUST00000117640 372 ntBASIC13.14□□□□□ -0.31
Ddx39aQ8VDW0 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC13.14□□□□□ -0.31
Ddx39aQ8VDW0 Gm14585-201ENSMUST00000120713 634 ntBASIC13.14□□□□□ -0.31
Ddx39aQ8VDW0 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Ddx39aQ8VDW0 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Ddx39aQ8VDW0 Gm6485-201ENSMUST00000160676 439 ntBASIC13.14□□□□□ -0.31
Ddx39aQ8VDW0 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC13.14□□□□□ -0.31
Ddx39aQ8VDW0 Mir8115-201ENSMUST00000184992 119 ntBASIC13.14□□□□□ -0.31
Ddx39aQ8VDW0 Gm45113-201ENSMUST00000207518 165 ntBASIC13.14□□□□□ -0.31
Ddx39aQ8VDW0 AC129219.2-201ENSMUST00000224324 701 ntBASIC13.14□□□□□ -0.31
Ddx39aQ8VDW0 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx39aQ8VDW0 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx39aQ8VDW0 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx39aQ8VDW0 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC13.14□□□□□ -0.31
Ddx39aQ8VDW0 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx39aQ8VDW0 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx39aQ8VDW0 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms