Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc28bQ8CEG5 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc28bQ8CEG5 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc28bQ8CEG5 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc28bQ8CEG5 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc28bQ8CEG5 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc28bQ8CEG5 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc28bQ8CEG5 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc28bQ8CEG5 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Ccdc28bQ8CEG5 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc28bQ8CEG5 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Ccdc28bQ8CEG5 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Ccdc28bQ8CEG5 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Ccdc28bQ8CEG5 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc28bQ8CEG5 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc28bQ8CEG5 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc28bQ8CEG5 Adar-204ENSMUST00000118341 2399 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc28bQ8CEG5 Gm6092-201ENSMUST00000121659 2029 ntBASIC11.73□□□□□ -0.53
Ccdc28bQ8CEG5 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc28bQ8CEG5 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC11.73□□□□□ -0.53
Ccdc28bQ8CEG5 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc28bQ8CEG5 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC11.73□□□□□ -0.53
Ccdc28bQ8CEG5 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Ccdc28bQ8CEG5 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC11.73□□□□□ -0.53
Ccdc28bQ8CEG5 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC11.73□□□□□ -0.53
Ccdc28bQ8CEG5 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc28bQ8CEG5 Gm27486-201ENSMUST00000184923 80 ntBASIC11.73□□□□□ -0.53
Ccdc28bQ8CEG5 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Ccdc28bQ8CEG5 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc28bQ8CEG5 Gm43692-201ENSMUST00000198236 1062 ntBASIC11.73□□□□□ -0.53
Ccdc28bQ8CEG5 Gm18584-201ENSMUST00000203098 964 ntBASIC11.73□□□□□ -0.53
Ccdc28bQ8CEG5 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc28bQ8CEG5 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc28bQ8CEG5 Gm7067-201ENSMUST00000207698 1249 ntBASIC11.73□□□□□ -0.53
Ccdc28bQ8CEG5 Gm9908-201ENSMUST00000211534 448 ntBASIC11.73□□□□□ -0.53
Ccdc28bQ8CEG5 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC11.73□□□□□ -0.53
Ccdc28bQ8CEG5 Gm18165-201ENSMUST00000217426 928 ntBASIC11.73□□□□□ -0.53
Ccdc28bQ8CEG5 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc28bQ8CEG5 Tyms-ps-201ENSMUST00000219550 915 ntBASIC11.73□□□□□ -0.53
Ccdc28bQ8CEG5 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc28bQ8CEG5 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc28bQ8CEG5 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc28bQ8CEG5 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc28bQ8CEG5 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc28bQ8CEG5 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc28bQ8CEG5 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc28bQ8CEG5 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc28bQ8CEG5 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc28bQ8CEG5 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc28bQ8CEG5 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc28bQ8CEG5 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc28bQ8CEG5 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
Ccdc28bQ8CEG5 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC11.73□□□□□ -0.53
Ccdc28bQ8CEG5 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc28bQ8CEG5 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc28bQ8CEG5 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc28bQ8CEG5 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc28bQ8CEG5 Gm44369-201ENSMUST00000204543 2175 ntBASIC11.72□□□□□ -0.53
Ccdc28bQ8CEG5 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc28bQ8CEG5 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Ccdc28bQ8CEG5 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Ccdc28bQ8CEG5 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc28bQ8CEG5 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Ccdc28bQ8CEG5 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Ccdc28bQ8CEG5 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc28bQ8CEG5 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc28bQ8CEG5 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc28bQ8CEG5 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC11.72□□□□□ -0.53
Ccdc28bQ8CEG5 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Ccdc28bQ8CEG5 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc28bQ8CEG5 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc28bQ8CEG5 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc28bQ8CEG5 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.72□□□□□ -0.53
Ccdc28bQ8CEG5 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc28bQ8CEG5 Gm23984-201ENSMUST00000157139 203 ntBASIC11.72□□□□□ -0.53
Ccdc28bQ8CEG5 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Ccdc28bQ8CEG5 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc28bQ8CEG5 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC11.72□□□□□ -0.53
Ccdc28bQ8CEG5 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc28bQ8CEG5 Gm10268-201ENSMUST00000085340 555 ntBASIC11.72□□□□□ -0.53
Ccdc28bQ8CEG5 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc28bQ8CEG5 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Ccdc28bQ8CEG5 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc28bQ8CEG5 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Ccdc28bQ8CEG5 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Ccdc28bQ8CEG5 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc28bQ8CEG5 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc28bQ8CEG5 Tank-203ENSMUST00000112495 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc28bQ8CEG5 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC11.72□□□□□ -0.53
Ccdc28bQ8CEG5 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc28bQ8CEG5 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Ccdc28bQ8CEG5 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc28bQ8CEG5 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Ccdc28bQ8CEG5 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc28bQ8CEG5 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc28bQ8CEG5 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc28bQ8CEG5 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Ccdc28bQ8CEG5 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc28bQ8CEG5 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc28bQ8CEG5 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms