Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vcpip1Q8CDG3 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.75□□□□□ -0.37
Vcpip1Q8CDG3 Gm15610-201ENSMUST00000120584 195 ntBASIC12.75□□□□□ -0.37
Vcpip1Q8CDG3 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.75□□□□□ -0.37
Vcpip1Q8CDG3 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vcpip1Q8CDG3 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC12.75□□□□□ -0.37
Vcpip1Q8CDG3 Gm22902-201ENSMUST00000158488 302 ntBASIC12.75□□□□□ -0.37
Vcpip1Q8CDG3 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.75□□□□□ -0.37
Vcpip1Q8CDG3 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vcpip1Q8CDG3 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vcpip1Q8CDG3 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vcpip1Q8CDG3 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC12.75□□□□□ -0.37
Vcpip1Q8CDG3 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vcpip1Q8CDG3 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vcpip1Q8CDG3 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vcpip1Q8CDG3 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vcpip1Q8CDG3 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.75□□□□□ -0.37
Vcpip1Q8CDG3 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Vcpip1Q8CDG3 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.75□□□□□ -0.37
Vcpip1Q8CDG3 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vcpip1Q8CDG3 Gm21769-201ENSMUST00000211922 111 ntBASIC12.75□□□□□ -0.37
Vcpip1Q8CDG3 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vcpip1Q8CDG3 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vcpip1Q8CDG3 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vcpip1Q8CDG3 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vcpip1Q8CDG3 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Vcpip1Q8CDG3 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vcpip1Q8CDG3 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vcpip1Q8CDG3 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vcpip1Q8CDG3 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vcpip1Q8CDG3 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vcpip1Q8CDG3 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vcpip1Q8CDG3 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vcpip1Q8CDG3 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vcpip1Q8CDG3 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vcpip1Q8CDG3 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vcpip1Q8CDG3 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vcpip1Q8CDG3 Gm18986-201ENSMUST00000216029 1986 ntBASIC12.74□□□□□ -0.37
Vcpip1Q8CDG3 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vcpip1Q8CDG3 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vcpip1Q8CDG3 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC12.74□□□□□ -0.37
Vcpip1Q8CDG3 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vcpip1Q8CDG3 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vcpip1Q8CDG3 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Vcpip1Q8CDG3 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vcpip1Q8CDG3 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vcpip1Q8CDG3 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Vcpip1Q8CDG3 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vcpip1Q8CDG3 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vcpip1Q8CDG3 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Vcpip1Q8CDG3 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vcpip1Q8CDG3 Gm14726-201ENSMUST00000120623 896 ntBASIC12.74□□□□□ -0.37
Vcpip1Q8CDG3 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.74□□□□□ -0.37
Vcpip1Q8CDG3 Gm12164-201ENSMUST00000121695 551 ntBASIC12.74□□□□□ -0.37
Vcpip1Q8CDG3 Gm15547-201ENSMUST00000122152 333 ntBASIC12.74□□□□□ -0.37
Vcpip1Q8CDG3 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.74□□□□□ -0.37
Vcpip1Q8CDG3 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.74□□□□□ -0.37
Vcpip1Q8CDG3 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Vcpip1Q8CDG3 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Vcpip1Q8CDG3 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.74□□□□□ -0.37
Vcpip1Q8CDG3 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.74□□□□□ -0.37
Vcpip1Q8CDG3 Gm16505-201ENSMUST00000179981 232 ntBASIC12.74□□□□□ -0.37
Vcpip1Q8CDG3 Gm27341-201ENSMUST00000183570 106 ntBASIC12.74□□□□□ -0.37
Vcpip1Q8CDG3 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.74□□□□□ -0.37
Vcpip1Q8CDG3 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.74□□□□□ -0.37
Vcpip1Q8CDG3 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.74□□□□□ -0.37
Vcpip1Q8CDG3 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.74□□□□□ -0.37
Vcpip1Q8CDG3 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vcpip1Q8CDG3 Gm10312-201ENSMUST00000078515 489 ntBASIC12.74□□□□□ -0.37
Vcpip1Q8CDG3 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC12.74□□□□□ -0.37
Vcpip1Q8CDG3 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vcpip1Q8CDG3 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vcpip1Q8CDG3 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Vcpip1Q8CDG3 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Vcpip1Q8CDG3 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vcpip1Q8CDG3 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC12.74□□□□□ -0.37
Vcpip1Q8CDG3 Gm36987-201ENSMUST00000194704 2979 ntBASIC12.74□□□□□ -0.37
Vcpip1Q8CDG3 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC12.74□□□□□ -0.37
Vcpip1Q8CDG3 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vcpip1Q8CDG3 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.74□□□□□ -0.37
Vcpip1Q8CDG3 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vcpip1Q8CDG3 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vcpip1Q8CDG3 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Vcpip1Q8CDG3 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.73□□□□□ -0.37
Vcpip1Q8CDG3 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vcpip1Q8CDG3 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Vcpip1Q8CDG3 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Vcpip1Q8CDG3 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Vcpip1Q8CDG3 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC12.73□□□□□ -0.37
Vcpip1Q8CDG3 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vcpip1Q8CDG3 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vcpip1Q8CDG3 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Vcpip1Q8CDG3 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vcpip1Q8CDG3 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Vcpip1Q8CDG3 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vcpip1Q8CDG3 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vcpip1Q8CDG3 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vcpip1Q8CDG3 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.73□□□□□ -0.37
Vcpip1Q8CDG3 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vcpip1Q8CDG3 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms